RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 KLF1Q13351 362 aaPredicted RBP16.44■□□□□ 0.22
ABCA1-203ENST00000423487 TTC39BQ5VTQ0 682 aaPredicted RBP16.44■□□□□ 0.22
ABCA1-203ENST00000423487 TANGO2Q6ICL3 276 aa16.44■□□□□ 0.22
ABCA1-203ENST00000423487 TMCO3Q6UWJ1 677 aa16.44■□□□□ 0.22
ABCA1-203ENST00000423487 MTSS1LQ765P7 747 aa16.44■□□□□ 0.22
ABCA1-203ENST00000423487 TDRD5Q8NAT2 981 aaKnown RBP16.44■□□□□ 0.22
ABCA1-203ENST00000423487 HJURPQ8NCD3 748 aaPredicted RBP16.44■□□□□ 0.22
ABCA1-203ENST00000423487 IGSF8Q969P0 613 aa16.44■□□□□ 0.22
ABCA1-203ENST00000423487 ELSPBP1Q96BH3 223 aa16.44■□□□□ 0.22
ABCA1-203ENST00000423487 TMA16Q96EY4 203 aaKnown RBP16.44■□□□□ 0.22
ABCA1-203ENST00000423487 HERPUD2Q9BSE4 406 aa16.44■□□□□ 0.22
ABCA1-203ENST00000423487 NEU3Q9UQ49 428 aa16.44■□□□□ 0.22
ABCA1-203ENST00000423487 BRWD1Q9NSI6 2320 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 WASH4PA8MWX3 477 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 GFRA2O00451 464 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 TRDMT1O14717 391 aaKnown RBP16.43■□□□□ 0.22
ABCA1-203ENST00000423487 DCLK1O15075 740 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 TSPAN3O60637 253 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 CYBBP04839 570 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 TGM2P21980 687 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 IFNAR2P48551 515 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 ADCY2Q08462 1091 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 PUS10Q3MIT2 529 aaKnown RBP16.43■□□□□ 0.22
ABCA1-203ENST00000423487 MPPE1Q53F39 396 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 ARTNQ5T4W7 220 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 PLD5Q8N7P1 536 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 RTL3Q8N8U3 475 aaKnown RBP16.43■□□□□ 0.22
ABCA1-203ENST00000423487 TTC13Q8NBP0 860 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 OSCP1Q8WVF1 389 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 PRICKLE1Q96MT3 831 aaPredicted RBP16.43■□□□□ 0.22
ABCA1-203ENST00000423487 LRRC3BQ96PB8 259 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 L2HGDHQ9H9P8 463 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 DUS2Q9NX74 493 aaKnown RBP16.43■□□□□ 0.22
ABCA1-203ENST00000423487 SMARCAL1Q9NZC9 954 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 MPP6Q9NZW5 540 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 FAM50BQ9Y247 325 aa16.43■□□□□ 0.22
ABCA1-203ENST00000423487 NUP210Q8TEM1 1887 aaPredicted RBP16.42■□□□□ 0.22
ABCA1-203ENST00000423487 HELZP42694 1942 aaKnown RBP16.42■□□□□ 0.22
ABCA1-203ENST00000423487 GOLGA6L10A0A0M3HER8 536 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 APOC4-APOC2K7ER74 178 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 PDE2AO00408 941 aaPredicted RBP16.42■□□□□ 0.22
ABCA1-203ENST00000423487 KRIT1O00522 736 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 CLDN11O75508 207 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 ECI2O75521 394 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 APOC2P02655 101 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 SERPINB6P35237 376 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 VCPP55072 806 aaKnown RBP16.42■□□□□ 0.22
ABCA1-203ENST00000423487 CDH4P55283 916 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 PAFAH1B3Q15102 231 aaKnown RBP16.42■□□□□ 0.22
ABCA1-203ENST00000423487 MPP7Q5T2T1 576 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 NCBP2-AS2Q69YL0 99 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 CHST9Q7L1S5 443 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 ADAT2Q7Z6V5 191 aaKnown RBP16.42■□□□□ 0.22
ABCA1-203ENST00000423487 NLRP14Q86W24 1093 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 MFSD6LQ8IWD5 586 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 YAF2Q8IY57 180 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 LZTR1Q8N653 840 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 MNS1Q8NEH6 495 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 MAFAQ8NHW3 353 aaPredicted RBP16.42■□□□□ 0.22
ABCA1-203ENST00000423487 DEPDC1BQ8WUY9 529 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 MYEOVQ96EZ4 313 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 PHF7Q9BWX1 381 aaPredicted RBP16.42■□□□□ 0.22
ABCA1-203ENST00000423487 ETNK2Q9NVF9 386 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 TMEM248Q9NWD8 314 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 NR2E1Q9Y466 385 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 WNT6Q9Y6F9 365 aa16.42■□□□□ 0.22
ABCA1-203ENST00000423487 DENND4AQ7Z401 1863 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 A0A1B0GVM2 712 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 TCRBV7S2A1N4TA0A589 114 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 TCAF2A6NFQ2 919 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 CNTN5O94779 1100 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 PSMC3P17980 439 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 NR2C2P49116 596 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 MAPKAPK2P49137 400 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 RPS24P62847 133 aaKnown RBP16.41■□□□□ 0.22
ABCA1-203ENST00000423487 FCHO2Q0JRZ9 810 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 PDGFRLQ15198 375 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 SMAD2Q15796 467 aaKnown RBP16.41■□□□□ 0.22
ABCA1-203ENST00000423487 ALFQ53S48 1182 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 PARM1Q6UWI2 310 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 VITQ6UXI7 678 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 BZW1Q7L1Q6 419 aaKnown RBP16.41■□□□□ 0.22
ABCA1-203ENST00000423487 CFAP52Q8N1V2 620 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 CEP112Q8N8E3 955 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 DDI1Q8WTU0 396 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 P3H4Q92791 437 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 FRMD8P1Q9BZ68 369 aaPredicted RBP16.41■□□□□ 0.22
ABCA1-203ENST00000423487 LINC00597Q9H2U6 94 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 SPHK2Q9NRA0 654 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 HOMER3Q9NSC5 361 aa16.41■□□□□ 0.22
ABCA1-203ENST00000423487 TBL1XO60907 577 aa16.4■□□□□ 0.22
ABCA1-203ENST00000423487 IRAK1P51617 712 aa16.4■□□□□ 0.22
ABCA1-203ENST00000423487 PTCRAQ6ISU1 281 aaPredicted RBP16.4■□□□□ 0.22
ABCA1-203ENST00000423487 C1orf228Q6PIY5 440 aa16.4■□□□□ 0.22
ABCA1-203ENST00000423487 TPGS1Q6ZTW0 290 aa16.4■□□□□ 0.22
ABCA1-203ENST00000423487 ZNF572Q7Z3I7 529 aaPredicted RBP16.4■□□□□ 0.22
ABCA1-203ENST00000423487 TFAP2DQ7Z6R9 452 aa16.4■□□□□ 0.22
ABCA1-203ENST00000423487 CCDC117Q8IWD4 279 aaPredicted RBP16.4■□□□□ 0.22
ABCA1-203ENST00000423487 ADGRG2Q8IZP9 1017 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms