RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 ANKRD62A6NC57 917 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 ARL5CA6NH57 179 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 C2CD4DB7Z1M9 353 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 E9PMD0 336 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 OFD1O75665 1012 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 PEX11BO96011 259 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 POMCP01189 267 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 LMNAP02545 664 aaKnown RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 ARF4P18085 180 aaPredicted RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 GLRA2P23416 452 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 CDC25AP30304 524 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 HOXA11P31270 313 aaPredicted RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 LONP1P36776 959 aaKnown RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 MATR3P43243 847 aaKnown RBP eCLIP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 NAMPTP43490 491 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 OR1G1P47890 313 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 GABREP78334 506 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 CUL4AQ13619 759 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 CAPSQ13938 189 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 KCNC3Q14003 757 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 ANGPT1Q15389 498 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 CLLU1OSQ5K130 101 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 CES5AQ6NT32 575 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 DPY19L2P1Q6NXN4 242 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 ANKRD54Q6NXT1 300 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 ZNF662Q6ZS27 426 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 LRRC55Q6ZSA7 311 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 DDX53Q86TM3 631 aaKnown RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 VPS52Q8N1B4 723 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 DCLK2Q8N568 766 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 MRPL43Q8N983 215 aaKnown RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 CPB2Q96IY4 423 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 ZNF396Q96N95 335 aaPredicted RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 IPO9Q96P70 1041 aaKnown RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 PLIN2Q99541 437 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 TCF25Q9BQ70 676 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 ZHX3Q9H4I2 956 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 MINDY3Q9H8M7 445 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 KMT5AQ9NQR1 393 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 XPNPEP1Q9NQW7 623 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 MRPL17Q9NRX2 175 aaKnown RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 TBC1D13Q9NVG8 400 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 DLL3Q9NYJ7 618 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 LARSQ9P2J5 1176 aaKnown RBP6.13□□□□□ -1.43
LINC00458-201ENST00000423442 COQ6Q9Y2Z9 468 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 MSRB2Q9Y3D2 182 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 IPPQ9Y573 584 aa6.13□□□□□ -1.43
LINC00458-201ENST00000423442 NT5C1B-RDH14C9J2C7 533 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 ACKR2O00590 384 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 PDPK1O15530 556 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 STX6O43752 255 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 TSPAN1O60635 241 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 HIP1RO75146 1068 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 TADA2AO75478 443 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 NPTXRO95502 500 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 PRKCBP05771 671 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 THP07101 528 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 GALTP07902 379 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 HOXB8P17481 243 aaPredicted RBP6.12□□□□□ -1.43
LINC00458-201ENST00000423442 NAT1P18440 290 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 AOC1P19801 751 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 SYT1P21579 422 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 SCP2P22307 547 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 AKAP5P24588 427 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 KLRC2P26717 231 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 ABCD1P33897 745 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 DDIT3P35638 169 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 PEX3P56589 373 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 CEBPZQ03701 1054 aaKnown RBP6.12□□□□□ -1.43
LINC00458-201ENST00000423442 MBTD1Q05BQ5 628 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 EP300Q09472 2414 aaPredicted RBP6.12□□□□□ -1.43
LINC00458-201ENST00000423442 DHX8Q14562 1220 aaKnown RBP6.12□□□□□ -1.43
LINC00458-201ENST00000423442 TRIP11Q15643 1979 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 FAM187BQ17R55 369 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 ATF7IP2Q5U623 682 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 PLPP4Q5VZY2 271 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 LAIR1Q6GTX8 287 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 RINT1Q6NUQ1 792 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 TMEM184AQ6ZMB5 413 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 CCDC105Q8IYK2 499 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 MYCT1Q8N699 235 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 ERCC4Q92889 916 aaPredicted RBP6.12□□□□□ -1.43
LINC00458-201ENST00000423442 MIEF2Q96C03 454 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 BICD1Q96G01 975 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 IGSF21Q96ID5 467 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 RPL10LQ96L21 214 aaKnown RBP6.12□□□□□ -1.43
LINC00458-201ENST00000423442 GAD1Q99259 594 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 TMEM175Q9BSA9 504 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 NTPCRQ9BSD7 190 aaKnown RBP6.12□□□□□ -1.43
LINC00458-201ENST00000423442 MRPL4Q9BYD3 311 aaKnown RBP6.12□□□□□ -1.43
LINC00458-201ENST00000423442 LRRC27Q9C0I9 530 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 FZD8Q9H461 694 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 POMKQ9H5K3 350 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 NRDE2Q9H7Z3 1164 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 POLD4Q9HCU8 107 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 TOPORSQ9NS56 1045 aaPredicted RBP6.12□□□□□ -1.43
LINC00458-201ENST00000423442 ASB1Q9Y576 335 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 R4GN57 208 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 CFAP47Q6ZTR5 3102 aa6.12□□□□□ -1.43
LINC00458-201ENST00000423442 CACNA1GO43497 2377 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms