RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 VASPP50552 380 aaPredicted RBP8.94□□□□□ -0.98
MDC1-204ENST00000422266 TPMTP51580 245 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 IRX4P78413 519 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 ECT2LQ008S8 904 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 CCDC15Q0P6D6 951 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 SLC14A1Q13336 389 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 EIF4EBP2Q13542 120 aaPredicted RBP8.94□□□□□ -0.98
MDC1-204ENST00000422266 CDKAL1Q5VV42 579 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 TMEM215Q68D42 235 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 ZNF776Q68DI1 518 aaPredicted RBP8.94□□□□□ -0.98
MDC1-204ENST00000422266 PPP1R2P3Q6NXS1 205 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 IL27RAQ6UWB1 636 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 LRRC31Q6UY01 552 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 FAM183BPQ6ZVS7 135 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 USP30Q70CQ3 517 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 DSG4Q86SJ6 1040 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 PASD1Q8IV76 773 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 LGI2Q8N0V4 545 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 DEFB106AQ8N104 65 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 WDTC1Q8N5D0 677 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 ADAM32Q8TC27 787 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 SKA1Q96BD8 255 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 TOE1Q96GM8 510 aaKnown RBP8.94□□□□□ -0.98
MDC1-204ENST00000422266 HSPA12BQ96MM6 686 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 NAA15Q9BXJ9 866 aaKnown RBP8.94□□□□□ -0.98
MDC1-204ENST00000422266 BTBD1Q9H0C5 482 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 NUCKS1Q9H1E3 243 aaKnown RBP8.94□□□□□ -0.98
MDC1-204ENST00000422266 RETREG1Q9H6L5 497 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 WDCPQ9H6R7 721 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 SGK2Q9HBY8 427 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.94□□□□□ -0.98
MDC1-204ENST00000422266 CYTH4Q9UIA0 394 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 CLEC4EQ9ULY5 219 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 FHOD1Q9Y613 1164 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 FRYLO94915 3013 aa8.94□□□□□ -0.98
MDC1-204ENST00000422266 NUP205Q92621 2012 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.93□□□□□ -0.98
MDC1-204ENST00000422266 EDDM13A0A1B0GTR0 161 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 A0A1B0GTW7 788 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 GOLGA6L7A0A1B0GV03 622 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 ANTXRLA6NF34 631 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 LRRC10BA6NIK2 292 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 C4orf47A7E2U8 309 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 SMTNL1A8MU46 457 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 UPK3BL1B0FP48 263 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 UPK3BL2E5RIL1 263 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 M0QYT0 321 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 ARHGAP33O14559 1287 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 TM4SF5O14894 197 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 OPHN1O60890 802 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 CALCAP01258 141 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 ADRB1P08588 477 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 PTMSP20962 102 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 ITPKAP23677 461 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 PRKCHP24723 683 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 SOX5P35711 763 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 CSKP41240 450 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 STAT1P42224 750 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 COPAP53621 1224 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 RPS24P62847 133 aaKnown RBP8.93□□□□□ -0.98
MDC1-204ENST00000422266 KRT83P78385 493 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 KCNMA1Q12791 1236 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 NME3Q13232 169 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 ZNF177Q13360 481 aaPredicted RBP8.93□□□□□ -0.98
MDC1-204ENST00000422266 KRT31Q15323 416 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 TEAD4Q15561 434 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 HNRNPA1L2Q32P51 320 aaKnown RBP8.93□□□□□ -0.98
MDC1-204ENST00000422266 PLEKHG6Q3KR16 790 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 ARL13BQ3SXY8 428 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 SLC25A52Q3SY17 297 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 PTPN20Q4JDL3 420 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 HSP90AA4PQ58FG1 418 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 PITRM1Q5JRX3 1037 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 FAM102AQ5T9C2 384 aaPredicted RBP8.93□□□□□ -0.98
MDC1-204ENST00000422266 RAP1GAP2Q684P5 730 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 NADSYN1Q6IA69 706 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 ARMCX6Q7L4S7 300 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 NEK11Q8NG66 645 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 CYB5D2Q8WUJ1 264 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 DNASE2BQ8WZ79 361 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 C1orf74Q96LT6 269 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 CCDC114Q96M63 670 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 PCMTD1Q96MG8 357 aaPredicted RBP8.93□□□□□ -0.98
MDC1-204ENST00000422266 PRICKLE1Q96MT3 831 aaPredicted RBP8.93□□□□□ -0.98
MDC1-204ENST00000422266 RPRD1AQ96P16 312 aaPredicted RBP8.93□□□□□ -0.98
MDC1-204ENST00000422266 VPS16Q9H269 839 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 ACP6Q9NPH0 428 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 TAB2Q9NYJ8 693 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 SLC25A13Q9UJS0 675 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 FARP1Q9Y4F1 1045 aaPredicted RBP8.93□□□□□ -0.98
MDC1-204ENST00000422266 DMXL1Q9Y485 3027 aa8.93□□□□□ -0.98
MDC1-204ENST00000422266 CACNA1AO00555 2505 aa8.92□□□□□ -0.98
MDC1-204ENST00000422266 ITIH6Q6UXX5 1313 aa8.92□□□□□ -0.98
MDC1-204ENST00000422266 MED19A0JLT2 244 aaPredicted RBP8.92□□□□□ -0.98
MDC1-204ENST00000422266 ANKRD62A6NC57 917 aa8.92□□□□□ -0.98
MDC1-204ENST00000422266 METTL12A8MUP2 240 aa8.92□□□□□ -0.98
MDC1-204ENST00000422266 ADH1BP00325 375 aa8.92□□□□□ -0.98
MDC1-204ENST00000422266 ERBB2P04626 1255 aa8.92□□□□□ -0.98
MDC1-204ENST00000422266 ENGP17813 658 aa8.92□□□□□ -0.98
MDC1-204ENST00000422266 CD70P32970 193 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms