RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 SDCBP2Q9H190 292 aa9.99□□□□□ -0.81
CMSS1-201ENST00000421999 ERVK-5Q9HDB9 667 aa9.99□□□□□ -0.81
CMSS1-201ENST00000421999 PIH1D1Q9NWS0 290 aaKnown RBP9.99□□□□□ -0.81
CMSS1-201ENST00000421999 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.99□□□□□ -0.81
CMSS1-201ENST00000421999 CFAP97Q9P2B7 532 aa9.99□□□□□ -0.81
CMSS1-201ENST00000421999 CLCA2Q9UQC9 943 aa9.99□□□□□ -0.81
CMSS1-201ENST00000421999 BTNL10A8MVZ5 291 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 HAS3O00219 553 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 ENPP3O14638 875 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 SYN3O14994 580 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CFLARO15519 480 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 PRPF4O43172 522 aaKnown RBP eCLIP9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CYP1A1P04798 512 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-201ENST00000421999 GLI1P08151 1106 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 KDELR1P24390 212 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CCNG2Q16589 344 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 ASTE1Q2TB18 679 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-201ENST00000421999 ERAP2Q6P179 960 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 ZNF280BQ86YH2 543 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 SNRNP25Q9BV90 132 aaKnown RBP9.98□□□□□ -0.81
CMSS1-201ENST00000421999 XYLT2Q9H1B5 865 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CHST7Q9NS84 486 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 SEPT3Q9UH03 358 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 MSI1O43347 362 aaKnown RBP9.98□□□□□ -0.81
CMSS1-201ENST00000421999 MATKP42679 507 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 MMRN1Q13201 1228 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 DDIASQ8IXT1 998 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 PHACTR4Q8IZ21 702 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CASKIN2Q8WXE0 1202 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 SGF29Q96ES7 293 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 HNRNPABQ99729 332 aaKnown RBP9.98□□□□□ -0.81
CMSS1-201ENST00000421999 OMDQ99983 421 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 TASP1Q9H6P5 420 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 GMIPQ9P107 970 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CDH16O75309 829 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 SOAT2O75908 522 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 IL1BP01584 269 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 UNGP13051 313 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-201ENST00000421999 TPH1P17752 444 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 SLC5A3P53794 718 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 TTLL9Q3SXZ7 439 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 MROH9Q5TGP6 573 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 SLC39A5Q6ZMH5 540 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 KATNAL2Q8IYT4 538 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CCDC197Q8NCU1 140 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 RHOBTB2Q9BYZ6 727 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 MIOSQ9NXC5 875 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 BCAP29Q9UHQ4 241 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 DNPEPQ9ULA0 475 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 SHOC2Q9UQ13 582 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 SMAPO00193 183 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 TULP2O00295 520 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 TRIM16O95361 564 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CRTAMO95727 393 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 PROZP22891 400 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 WARSP23381 471 aaKnown RBP9.98□□□□□ -0.81
CMSS1-201ENST00000421999 LIG3P49916 1009 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 LONRF1Q17RB8 773 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 TTC7BQ86TV6 843 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 C4orf33Q8N1A6 199 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 FBXO25Q8TCJ0 367 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 HES6Q96HZ4 224 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 EXOC2Q96KP1 924 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 PAAF1Q9BRP4 392 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CLPBQ9H078 707 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 KATNBL1Q9H079 304 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 STN1Q9H668 368 aaKnown RBP9.98□□□□□ -0.81
CMSS1-201ENST00000421999 ZDHHC6Q9H6R6 413 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 CASS4Q9NQ75 786 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 PCMTD2Q9NV79 361 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 PKD2L2Q9NZM6 624 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 PAPPA2Q9BXP8 1791 aa9.98□□□□□ -0.81
CMSS1-201ENST00000421999 A0A1W2PQH9 124 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 DIAPH2O60879 1101 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 USP12O75317 370 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 TMCC1O94876 653 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 FECHP22830 423 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 HMOX2P30519 316 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 GPD2P43304 727 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 DOCK1Q14185 1865 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 OOSP2Q86WS3 158 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 PDCD7Q8N8D1 485 aaKnown RBP9.97□□□□□ -0.81
CMSS1-201ENST00000421999 FLCNQ8NFG4 579 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 HTR3CQ8WXA8 447 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 BADQ92934 168 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 CD274Q9NZQ7 290 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 DEC1Q9P2X7 70 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 PPARGC1AQ9UBK2 798 aaKnown RBP9.97□□□□□ -0.81
CMSS1-201ENST00000421999 DNAJB4Q9UDY4 337 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 SDR42E2A6NKP2 422 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 TBC1D4O60343 1298 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 SRP72O76094 671 aaKnown RBP9.97□□□□□ -0.81
CMSS1-201ENST00000421999 CTGFP29279 349 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 GYS2P54840 703 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 RBBP7Q16576 425 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 DBN1Q16643 649 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 CFAP52Q8N1V2 620 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 TBC1D19Q8N5T2 526 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 NETO2Q8NC67 525 aa9.97□□□□□ -0.81
CMSS1-201ENST00000421999 OR2W6PQ8NHA6 318 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms