RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 C21orf59P57076 290 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 TBX4P57082 545 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 ENPEPQ07075 957 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 HNRNPA1L2Q32P51 320 aaKnown RBP8.41□□□□□ -1.06
VIM-202ENST00000421459 EDRF1Q3B7T1 1238 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 C9orf64Q5T6V5 341 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 MSANTD2Q6P1R3 559 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 TMEM270Q6UE05 265 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 LCLAT1Q6UWP7 414 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 CIR1Q86X95 450 aaPredicted RBP8.41□□□□□ -1.06
VIM-202ENST00000421459 SCUBE3Q8IX30 993 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 APCDD1Q8J025 514 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 STK40Q8N2I9 435 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 AADATQ8N5Z0 425 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 PIP4K2CQ8TBX8 421 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 KCTD13Q8WZ19 329 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 TTC17Q96AE7 1141 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 RPL10LQ96L21 214 aaKnown RBP8.41□□□□□ -1.06
VIM-202ENST00000421459 FCRL2Q96LA5 508 aaPredicted RBP8.41□□□□□ -1.06
VIM-202ENST00000421459 FAM129BQ96TA1 746 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 PCED1AQ9H1Q7 454 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 SGK2Q9HBY8 427 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 OSGEPQ9NPF4 335 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 AASDHPPTQ9NRN7 309 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 FTSJ1Q9UET6 329 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 SUN2Q9UH99 717 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 ERVW-1Q9UQF0 538 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 NAALADL1Q9UQQ1 740 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 COQ4Q9Y3A0 265 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 PCDHB4Q9Y5E5 795 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 IGSF10Q6WRI0 2623 aa8.41□□□□□ -1.06
VIM-202ENST00000421459 MUC22E2RYF6 1773 aaPredicted RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 A0A1W2PPC4 97 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 A0A1W2PR77 199 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 M0QYV0 167 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 VILLO15195 856 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 TLX3O43711 291 aaPredicted RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 PCDHGA12O60330 932 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 STX10O60499 249 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 LATS1O95835 1130 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 SETSIPP0DME0 302 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 SLC8A1P32418 973 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 PSMD8P48556 350 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 SLC11A2P49281 568 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 ST8SIA6P61647 398 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 PPP2CBP62714 309 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 RACK1P63244 317 aaKnown RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 PPP2CAP67775 309 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 PITX1P78337 314 aaPredicted RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 KRT85P78386 507 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 SEMG2Q02383 582 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 ZBTB16Q05516 673 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 CST6Q15828 149 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 POM121L1PQ3SYA9 428 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 TTC31Q49AM3 519 aaPredicted RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 DCAF6Q58WW2 860 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 PITRM1Q5JRX3 1037 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 SYPL2Q5VXT5 272 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 RRAGAQ7L523 313 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 ARHGEF19Q8IW93 802 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 GALNT15Q8N3T1 639 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 TTC39CQ8N584 583 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 EID2Q8N6I1 236 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 PDCD7Q8N8D1 485 aaKnown RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 FIBINQ8TAL6 211 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 DQX1Q8TE96 717 aaKnown RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 SAP25Q8TEE9 199 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 SLC35C1Q96A29 364 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 FAXDC2Q96IV6 333 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 CNDP2Q96KP4 475 aaKnown RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 ELF4Q99607 663 aaPredicted RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 OMDQ99983 421 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 ACE2Q9BYF1 805 aaPredicted RBP8.4□□□□□ -1.06
VIM-202ENST00000421459 CNGB3Q9NQW8 809 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 NCKAP1Q9Y2A7 1128 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 CA5BQ9Y2D0 317 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 RAI2Q9Y5P3 530 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 MYH10P35580 1976 aa8.4□□□□□ -1.06
VIM-202ENST00000421459 ANKRD11Q6UB99 2663 aaPredicted RBP8.4□□□□□ -1.07
VIM-202ENST00000421459 ENC1O14682 589 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 LDOC1O95751 146 aaPredicted RBP8.39□□□□□ -1.07
VIM-202ENST00000421459 ITGAVP06756 1048 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 JUPP14923 745 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 CD44P16070 742 aaKnown RBP8.39□□□□□ -1.07
VIM-202ENST00000421459 ABCB4P21439 1286 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 MZF1P28698 734 aaPredicted RBP8.39□□□□□ -1.07
VIM-202ENST00000421459 CD38P28907 300 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 MAT2AP31153 395 aaKnown RBP8.39□□□□□ -1.07
VIM-202ENST00000421459 EIF2S3P41091 472 aaKnown RBP8.39□□□□□ -1.07
VIM-202ENST00000421459 FMO5P49326 533 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 TARDBPQ13148 414 aaKnown RBP eCLIP8.39□□□□□ -1.07
VIM-202ENST00000421459 E2F5Q15329 346 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 TAF5Q15542 800 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 CNGA2Q16280 664 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 ZC3H12AQ5D1E8 599 aaKnown RBP8.39□□□□□ -1.07
VIM-202ENST00000421459 MS4A13Q5J8X5 152 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 MPP7Q5T2T1 576 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 RAP1GAP2Q684P5 730 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 DENND1BQ6P3S1 775 aa8.39□□□□□ -1.07
VIM-202ENST00000421459 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms