RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 KCTD13Q8WZ19 329 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 CDKL2Q92772 493 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 OLFM3Q96PB7 478 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 ATXN3LQ9H3M9 355 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 NOD2Q9HC29 1040 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 WDR6Q9NNW5 1121 aaKnown RBP11.24□□□□□ -0.61
DDX56-203ENST00000421223 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 CNGB3Q9NQW8 809 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 ARMCX1Q9P291 453 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 FBXW11Q9UKB1 542 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 GIT1Q9Y2X7 761 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.23□□□□□ -0.61
DDX56-203ENST00000421223 TRDMT1O14717 391 aaKnown RBP11.23□□□□□ -0.61
DDX56-203ENST00000421223 SEPT4O43236 478 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 MGRN1O60291 552 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 OPHN1O60890 802 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 RFPL1O75677 317 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 DCTN3O75935 186 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 FBXO21O94952 628 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 MYL2P10916 166 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 TPSB2P20231 275 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 SERPINB3P29508 390 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 CPA2P48052 419 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 RPL10AP62906 217 aaKnown RBP11.23□□□□□ -0.61
DDX56-203ENST00000421223 LPIN1Q14693 890 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 TPSAB1Q15661 275 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 GALNTL6Q49A17 601 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 BTBD8Q5XKL5 378 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 OTOP3Q7RTS5 596 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 SPATA2LQ8IUW3 424 aaPredicted RBP11.23□□□□□ -0.61
DDX56-203ENST00000421223 C10orf82Q8WW14 230 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 PRR11Q96HE9 360 aaPredicted RBP11.23□□□□□ -0.61
DDX56-203ENST00000421223 B3GALT6Q96L58 329 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 RILPQ96NA2 401 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 EPAS1Q99814 870 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 TMEM120AQ9BXJ8 343 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 PHACTR1Q9C0D0 580 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 TRPV6Q9H1D0 765 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 ACSS2Q9NR19 701 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 FETUBQ9UGM5 382 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 ATP6V1G2O95670 118 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 NFKB1P19838 968 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 PTPN3P26045 913 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 TYK2P29597 1187 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 SCNN1AP37088 669 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 TSPY1Q01534 308 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 BST1Q10588 318 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 CRYMQ14894 314 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 RASA2Q15283 850 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 PARP6Q2NL67 630 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 HSP90AA5PQ58FG0 334 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 ARHGAP36Q6ZRI8 547 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 CMC1Q7Z7K0 106 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 TTC7BQ86TV6 843 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 E2F7Q96AV8 911 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 SLC2A13Q96QE2 648 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 RTP3Q9BQQ7 232 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 ZNF358Q9NW07 568 aa11.23□□□□□ -0.61
DDX56-203ENST00000421223 ARHGAP42A6NI28 874 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 HACD1B0YJ81 288 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 TPP1O14773 563 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 TSHRP16473 764 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 PRKCHP24723 683 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 RPL34P49207 117 aaKnown RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 CAP1Q01518 475 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 ZBTB17Q13105 803 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 DDR2Q16832 855 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 SLC39A12Q504Y0 691 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 LIMS2Q7Z4I7 341 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 CCDC91Q7Z6B0 441 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 THEM5Q8N1Q8 247 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 SPATA22Q8NHS9 363 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 AGR3Q8TD06 166 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 MAGEC3Q8TD91 643 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 DQX1Q8TE96 717 aaKnown RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 LRRC39Q96DD0 335 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 MFSD3Q96ES6 412 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 OXNAD1Q96HP4 312 aaPredicted RBP11.22□□□□□ -0.61
DDX56-203ENST00000421223 AGAP2Q99490 1192 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 BFARQ9NZS9 450 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 PLLPQ9Y342 182 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 PDE4DIPQ5VU43 2346 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 HMX2A2RU54 273 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 DCLK1O15075 740 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 KPNA6O60684 536 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 UNC5CO95185 931 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 POLBP06746 335 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 HMBSP08397 361 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 NEK3P51956 506 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 SLC18A1P54219 525 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 SLC18A2Q05940 514 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 SREBF2Q12772 1141 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 DPYSQ14117 519 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 RCN2Q14257 317 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 C4orf22Q6V702 233 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 ARCQ7LC44 396 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 NT5C3BQ969T7 300 aa11.22□□□□□ -0.61
DDX56-203ENST00000421223 UNKQ9C0B0 810 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms