RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ASLP04424 464 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 HOXD12P35452 270 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 STAT1P42224 750 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 RNASE9P60153 205 aaKnown RBP17.03■□□□□ 0.32
LINC00404-201ENST00000418660 NOMO3P69849 1222 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 CDR2Q01850 454 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 UBXN1Q04323 297 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 ZNF33AQ06730 810 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 FSCBQ5H9T9 825 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 STPG1Q5TH74 334 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 TTC39BQ5VTQ0 682 aaPredicted RBP17.03■□□□□ 0.32
LINC00404-201ENST00000418660 PEAR1Q5VY43 1037 aaPredicted RBP17.03■□□□□ 0.32
LINC00404-201ENST00000418660 IL31Q6EBC2 164 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 XYLT1Q86Y38 959 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 DEFB119Q8N690 84 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 OR2T3Q8NH03 318 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
LINC00404-201ENST00000418660 SPAG5Q96R06 1193 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 NPY6RQ99463 290 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 HSD3B7Q9H2F3 369 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 TMEM74BQ9NUR3 256 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 TMEM51Q9NW97 253 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 SUN2Q9UH99 717 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 EVLQ9UI08 416 aaPredicted RBP17.03■□□□□ 0.32
LINC00404-201ENST00000418660 PILRBQ9UKJ0 227 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 INTS6Q9UL03 887 aaKnown RBP17.03■□□□□ 0.32
LINC00404-201ENST00000418660 STAP1Q9ULZ2 295 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 DMXL1Q9Y485 3027 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 LNP1A1A4G5 178 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 PATE3B3GLJ2 98 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 MOCS3O95396 460 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 C7P10643 843 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 ACADMP11310 421 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 ITPKAP23677 461 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 CD6P30203 668 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 OXTRP30559 389 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 CSKP41240 450 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 TPMTP51580 245 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 ST8SIA6P61647 398 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 PITRM1Q5JRX3 1037 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 RABGAP1LQ5R372 815 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 FAM102AQ5T9C2 384 aaPredicted RBP17.02■□□□□ 0.32
LINC00404-201ENST00000418660 OTUD1Q5VV17 481 aaPredicted RBP17.02■□□□□ 0.32
LINC00404-201ENST00000418660 NAA35Q5VZE5 725 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 MMS22LQ6ZRQ5 1243 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 APTXQ7Z2E3 356 aaKnown RBP17.02■□□□□ 0.32
LINC00404-201ENST00000418660 SLC41A1Q8IVJ1 513 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 AOPEPQ8N6M6 819 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 KDM1BQ8NB78 822 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 NEK11Q8NG66 645 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 SLC20A1Q8WUM9 679 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 CPA5Q8WXQ8 436 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 NT5C3BQ969T7 300 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 PGAP3Q96FM1 320 aaPredicted RBP17.02■□□□□ 0.32
LINC00404-201ENST00000418660 ZNF419Q96HQ0 510 aaPredicted RBP17.02■□□□□ 0.32
LINC00404-201ENST00000418660 ERGIC2Q96RQ1 377 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 EDEM2Q9BV94 578 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 FBRSQ9HAH7 460 aa17.02■□□□□ 0.32
LINC00404-201ENST00000418660 DCHS1Q96JQ0 3298 aa17.02■□□□□ 0.31
LINC00404-201ENST00000418660 TM4SF5O14894 197 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 F9P00740 461 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 IGLV3-19P01714 112 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 CYP1A1P04798 512 aaPredicted RBP17.01■□□□□ 0.31
LINC00404-201ENST00000418660 CHRNB2P17787 502 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 CXCR3P49682 368 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 SULT1E1P49888 294 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 IRX4P78413 519 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 SLC12A1Q13621 1099 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 AUHQ13825 339 aaKnown RBP17.01■□□□□ 0.31
LINC00404-201ENST00000418660 SLC25A52Q3SY17 297 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 ANO6Q4KMQ2 910 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 C2CD6Q53TS8 623 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 TRIM61Q5EBN2 209 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 BRMS1LQ5PSV4 323 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 FBXL22Q6P050 247 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 CCAR2Q8N163 923 aaKnown RBP17.01■□□□□ 0.31
LINC00404-201ENST00000418660 ZNF366Q8N895 744 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 FOXJ1Q92949 421 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 TOE1Q96GM8 510 aaKnown RBP17.01■□□□□ 0.31
LINC00404-201ENST00000418660 MYO19Q96H55 970 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 MRGPRX3Q96LB0 322 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 BPIFA3Q9BQP9 254 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 WDCPQ9H6R7 721 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 PRSS16Q9NQE7 514 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 PIGVQ9NUD9 493 aa17.01■□□□□ 0.31
LINC00404-201ENST00000418660 WSB2Q9NYS7 404 aaPredicted RBP17.01■□□□□ 0.31
LINC00404-201ENST00000418660 MUC22E2RYF6 1773 aaPredicted RBP17.01■□□□□ 0.31
LINC00404-201ENST00000418660 TNRC6BQ9UPQ9 1833 aaKnown RBP17■□□□□ 0.31
LINC00404-201ENST00000418660 ATXN2Q99700 1313 aaKnown RBP17■□□□□ 0.31
LINC00404-201ENST00000418660 A0A1B0GVM2 712 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 MED19A0JLT2 244 aaPredicted RBP17■□□□□ 0.31
LINC00404-201ENST00000418660 TCAF2A6NFQ2 919 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 GOLGA8SH3BPF8 625 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 PAGE1O75459 146 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 SRPRAP08240 638 aaKnown RBP17■□□□□ 0.31
LINC00404-201ENST00000418660 ATP1A3P13637 1013 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 TFE3P19532 575 aaPredicted RBP17■□□□□ 0.31
LINC00404-201ENST00000418660 OXCT1P55809 520 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 FMO1Q01740 532 aa17■□□□□ 0.31
LINC00404-201ENST00000418660 DEUP1Q05D60 604 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms