RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PANX2Q96RD6 677 aa19.27■□□□□ 0.68
PTCD3-204ENST00000418628 ZNF212Q9UDV6 495 aa19.27■□□□□ 0.68
PTCD3-204ENST00000418628 RALGAPA1Q6GYQ0 2036 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 TYW5A2RUC4 315 aaKnown RBP19.26■□□□□ 0.67
PTCD3-204ENST00000418628 TBC1D3BA6NDS4 549 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 HNRNPLP14866 589 aaKnown RBP eCLIP19.26■□□□□ 0.67
PTCD3-204ENST00000418628 ADRA1BP35368 520 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 ENPP2Q13822 863 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 TSR1Q2NL82 804 aaKnown RBP19.26■□□□□ 0.67
PTCD3-204ENST00000418628 CYP4V2Q6ZWL3 525 aaPredicted RBP19.26■□□□□ 0.67
PTCD3-204ENST00000418628 CHST9Q7L1S5 443 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 SYT13Q7L8C5 426 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 CFAP52Q8N1V2 620 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 WFIKKN2Q8TEU8 576 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 ACDQ96AP0 544 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 PACSIN1Q9BY11 444 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 MRPL47Q9HD33 250 aaKnown RBP19.26■□□□□ 0.67
PTCD3-204ENST00000418628 RAPGEFL1Q9UHV5 662 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 VANGL2Q9ULK5 521 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 MMP17Q9ULZ9 603 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 THADAQ6YHU6 1953 aa19.26■□□□□ 0.67
PTCD3-204ENST00000418628 ANKRD36A6QL64 1941 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 DRGXA6NNA5 263 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 LAMTOR5O43504 91 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 ADAM23O75077 832 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 ATG13O75143 517 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 LCA5LO95447 670 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 HOXA6P31267 233 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 CD70P32970 193 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 AIF1P55008 147 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 SEC13P55735 322 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 LMAN2Q12907 356 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 RABGAP1LQ5R372 815 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 EMC10Q5UCC4 262 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 EGFLAMQ63HQ2 1017 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 CXorf57Q6NSI4 855 aaKnown RBP19.25■□□□□ 0.67
PTCD3-204ENST00000418628 NUDT18Q6ZVK8 323 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.25■□□□□ 0.67
PTCD3-204ENST00000418628 ADIPOR2Q86V24 386 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 MFN1Q8IWA4 741 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 CCAR2Q8N163 923 aaKnown RBP19.25■□□□□ 0.67
PTCD3-204ENST00000418628 NIPA2Q8N8Q9 360 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 OSBPL2Q9H1P3 480 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 CD248Q9HCU0 757 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 GGA2Q9UJY4 613 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 INTS6Q9UL03 887 aaKnown RBP19.25■□□□□ 0.67
PTCD3-204ENST00000418628 SNX10Q9Y5X0 201 aa19.25■□□□□ 0.67
PTCD3-204ENST00000418628 OTOGLQ3ZCN5 2332 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 ABCA7Q8IZY2 2146 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 AKR1B10O60218 316 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 PABPC1P11940 636 aaKnown RBP19.24■□□□□ 0.67
PTCD3-204ENST00000418628 PSMA2P25787 234 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 HOXC13P31276 330 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 CXCL12P48061 93 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 PTPN5P54829 565 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 SEMA3BQ13214 749 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 FUT11Q495W5 492 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 C2orf27AQ580R0 203 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 FSCBQ5H9T9 825 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 CIR1Q86X95 450 aaPredicted RBP19.24■□□□□ 0.67
PTCD3-204ENST00000418628 AHI1Q8N157 1196 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 ALLCQ8N6M5 410 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 ZNF513Q8N8E2 541 aaPredicted RBP19.24■□□□□ 0.67
PTCD3-204ENST00000418628 CCDC42Q96M95 316 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 RPRD1AQ96P16 312 aaPredicted RBP19.24■□□□□ 0.67
PTCD3-204ENST00000418628 GABRG3Q99928 467 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 NUP85Q9BW27 656 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 DEF6Q9H4E7 631 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 ABCB8Q9NUT2 735 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 SPTLC3Q9NUV7 552 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 STIM2Q9P246 746 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 THAP10Q9P2Z0 257 aaPredicted RBP19.24■□□□□ 0.67
PTCD3-204ENST00000418628 MYO1AQ9UBC5 1043 aa19.24■□□□□ 0.67
PTCD3-204ENST00000418628 PPARGC1AQ9UBK2 798 aaKnown RBP19.24■□□□□ 0.67
PTCD3-204ENST00000418628 E9PAM4 449 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 SGK1O00141 431 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 LRCH4O75427 683 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 TMEM253P0C7T8 217 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 SP9P0CG40 484 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 TIE1P35590 1138 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 CDH18Q13634 790 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 ACAP1Q15027 740 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 ARL13BQ3SXY8 428 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 ALFQ53S48 1182 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 TMEM139Q8IV31 216 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 PEBP4Q96S96 227 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 SIK2Q9H0K1 926 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 POLR3BQ9NW08 1133 aaPredicted RBP19.23■□□□□ 0.67
PTCD3-204ENST00000418628 ELOVL2Q9NXB9 296 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 IMPACTQ9P2X3 320 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 FZD10Q9ULW2 581 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 TBC1D30Q9Y2I9 924 aa19.23■□□□□ 0.67
PTCD3-204ENST00000418628 USP34Q70CQ2 3546 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 NUMA1Q14980 2115 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 FAM72CH0Y354 149 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 NPC1O15118 1278 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 CLDN11O75508 207 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 CNTN5O94779 1100 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 H2AFZP0C0S5 128 aa19.22■□□□□ 0.67
PTCD3-204ENST00000418628 PLK1P53350 603 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms