RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 IRGCQ6NXR0 463 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 C4orf22Q6V702 233 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 HFE2Q6ZVN8 426 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 MARK2Q7KZI7 788 aaKnown RBP14.87□□□□□ -0.03
HDAC9-208ENST00000417496 PID1Q7Z2X4 250 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 CTU1Q7Z7A3 348 aaKnown RBP14.87□□□□□ -0.03
HDAC9-208ENST00000417496 RASSF3Q86WH2 238 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 FAM72BQ86X60 149 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 PHTF2Q8N3S3 785 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 RNF139Q8WU17 664 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 CDKL2Q92772 493 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 APOL2Q9BQE5 337 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 MROH8Q9H579 483 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 CACNG4Q9UBN1 327 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 SOX13Q9UN79 622 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 CCDC78A2IDD5 438 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 KPNA7A9QM74 516 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 GOLGA8TH3BQL2 631 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 CXCL11O14625 94 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 AOC1P19801 751 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 MATKP42679 507 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 FBXO47Q5MNV8 452 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 OTUD1Q5VV17 481 aaPredicted RBP14.87□□□□□ -0.03
HDAC9-208ENST00000417496 ARHGAP17Q68EM7 881 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 OR52E8Q6IFG1 317 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 MYLK4Q86YV6 388 aaPredicted RBP14.87□□□□□ -0.03
HDAC9-208ENST00000417496 RNF169Q8NCN4 708 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 BEST2Q8NFU1 509 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 RAB3IL1Q8TBN0 382 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 PPP1R36Q96LQ0 422 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 TXNDC16Q9P2K2 825 aa14.87□□□□□ -0.03
HDAC9-208ENST00000417496 F8W8V4 182 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 M0QYT0 321 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SMIM24O75264 130 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 GLRA3O75311 464 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 PGAM1P18669 254 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SOX4Q06945 474 aaPredicted RBP14.86□□□□□ -0.03
HDAC9-208ENST00000417496 TRMT5Q32P41 509 aaKnown RBP14.86□□□□□ -0.03
HDAC9-208ENST00000417496 DNAL1Q4LDG9 190 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SLC27A1Q6PCB7 646 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 RNF111Q6ZNA4 994 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 RAPH1Q70E73 1250 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 NT5DC4Q86YG4 428 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 CCNJLQ8IV13 435 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 ANKRD13AQ8IZ07 590 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 ACVR1CQ8NER5 493 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 ATP2A3Q93084 1043 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 GCOM2Q9BZD3 368 aaPredicted RBP14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SNX25Q9H3E2 840 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 ANLNQ9NQW6 1124 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 COPG2Q9UBF2 871 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 PACSIN3Q9UKS6 424 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 ZNF487B1APH4 448 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SERPINE1P05121 402 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 FDFT1P37268 417 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SNX16P57768 344 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 IRF9Q00978 393 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 HIC1Q14526 733 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SLC25A52Q3SY17 297 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SMYD5Q6GMV2 418 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 NAPRTQ6XQN6 538 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 UNC93AQ86WB7 457 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SPDYE1Q8NFV5 336 aaPredicted RBP14.86□□□□□ -0.03
HDAC9-208ENST00000417496 ZNF483Q8TF39 744 aaPredicted RBP14.86□□□□□ -0.03
HDAC9-208ENST00000417496 ADAMTS10Q9H324 1103 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SNX15Q9NRS6 342 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 PIGVQ9NUD9 493 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 DCDC2Q9UHG0 476 aa14.86□□□□□ -0.03
HDAC9-208ENST00000417496 SMIM28A0A1B0GU29 152 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 I6L893 689 aaPredicted RBP14.85□□□□□ -0.03
HDAC9-208ENST00000417496 DCXO43602 365 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 RALBP11234 206 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 CNTFP26441 200 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 CACNA2D1P54289 1103 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 AP2B1P63010 937 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 C6orf163Q5TEZ5 329 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 FOXB2Q5VYV0 432 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 CYS1Q717R9 158 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 DCLK2Q8N568 766 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 TMEM40Q8WWA1 233 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 MFSD3Q96ES6 412 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 CERS2Q96G23 380 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 PLEKHA5Q9HAU0 1116 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 NDE1Q9NXR1 346 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 UBP1Q9NZI7 540 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 CPSF2Q9P2I0 782 aaKnown RBP14.85□□□□□ -0.03
HDAC9-208ENST00000417496 GTF2IRD1Q9UHL9 959 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 SCOCQ9UIL1 159 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 BRCA1P38398 1863 aaKnown RBP14.85□□□□□ -0.03
HDAC9-208ENST00000417496 E9PBE3 544 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 ZNF195O14628 629 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 KLHL41O60662 606 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 MLNP12872 115 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 SMPD1P17405 629 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 TPH1P17752 444 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 LBRQ14739 615 aaKnown RBP14.85□□□□□ -0.03
HDAC9-208ENST00000417496 TCHHL1Q5QJ38 904 aaPredicted RBP14.85□□□□□ -0.03
HDAC9-208ENST00000417496 STRADAQ7RTN6 431 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 CRYBG2Q8N1P7 616 aa14.85□□□□□ -0.03
HDAC9-208ENST00000417496 LRRC52Q8N7C0 313 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms