RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 ENPEPQ07075 957 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 SLC14A1Q13336 389 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 CDH18Q13634 790 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 SUZ12Q15022 739 aaKnown RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 EIF4HQ15056 248 aaKnown RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 TRIP4Q15650 581 aaPredicted RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 ZNF423Q2M1K9 1284 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 TTC31Q49AM3 519 aaPredicted RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 ZCWPW2Q504Y3 356 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 TMEM215Q68D42 235 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 MBLAC2Q68D91 279 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 PM20D1Q6GTS8 502 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 PMF1Q6P1K2 205 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 C19orf48Q6RUI8 117 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 IL27RAQ6UWB1 636 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 PIP4P1Q86T03 277 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 DHX40Q8IX18 779 aaKnown RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 AHI1Q8N157 1196 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 CPXM2Q8N436 756 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 CADM4Q8NFZ8 388 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 OR2T3Q8NH03 318 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 CLEC4CQ8WTT0 213 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 TFAP2BQ92481 460 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 OMDQ99983 421 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 DDX50Q9BQ39 737 aaKnown RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 GTPBP4Q9BZE4 634 aaKnown RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 ZDHHC5Q9C0B5 715 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 BTBD1Q9H0C5 482 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 MTG2Q9H4K7 406 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 C6orf106Q9H6K1 298 aaPredicted RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 METTL14Q9HCE5 456 aaKnown RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 CNGB3Q9NQW8 809 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 TM7SF3Q9NS93 570 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 DNAAF2Q9NVR5 837 aaKnown RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 USP36Q9P275 1121 aaKnown RBP7.25□□□□□ -1.25
COPS3-202ENST00000417352 SUN2Q9UH99 717 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 FBXO10Q9UK96 956 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 CTNND2Q9UQB3 1225 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 MSRB2Q9Y3D2 182 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 NEUROG3Q9Y4Z2 214 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 WASF2Q9Y6W5 498 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 PCNX2A6NKB5 2137 aa7.25□□□□□ -1.25
COPS3-202ENST00000417352 AKAP13Q12802 2813 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 FAM237AA0A1B0GTK4 181 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 RNF225M0QZC1 329 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 O00370 1275 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 CAPN5O15484 640 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 BNIP3LO60238 219 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 ACSL4O60488 711 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 RNASEH2AO75792 299 aaKnown RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 LETM1O95202 739 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 MOCS3O95396 460 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 SEMA4FO95754 770 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 PAEPP09466 180 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 DLDP09622 509 aaKnown RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 COPAP53621 1224 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 DAOAP59103 153 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 SH3BP2P78314 561 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 ACCSLQ4AC99 568 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 PRAMEF14Q5SWL7 426 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 PEAR1Q5VY43 1037 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 NUGGCQ68CJ6 796 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 ZNF776Q68DI1 518 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 LCLAT1Q6UWP7 414 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 LAYNQ6UX15 382 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 MMAAQ8IVH4 418 aaKnown RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 LGI2Q8N0V4 545 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 FMR1NBQ8N0W7 255 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 KDF1Q8NAX2 398 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 RBBP8NLQ8NC74 664 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 HJURPQ8NCD3 748 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 WFIKKN2Q8TEU8 576 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 NELFBQ8WX92 580 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 KCTD13Q8WZ19 329 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 KAT5Q92993 513 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 SLC35C1Q96A29 364 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 DHTKD1Q96HY7 919 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 FAXDC2Q96IV6 333 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 CD248Q9HCU0 757 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 UBE2TQ9NPD8 197 aaPredicted RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 PRSS16Q9NQE7 514 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 AASDHPPTQ9NRN7 309 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 FBXL12Q9NXK8 326 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 PCDHGC3Q9UN70 934 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.24□□□□□ -1.25
COPS3-202ENST00000417352 NAALADL1Q9UQQ1 740 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 ANKRD6Q9Y2G4 727 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 FNDC3AQ9Y2H6 1198 aaKnown RBP7.24□□□□□ -1.25
COPS3-202ENST00000417352 GTF3C3Q9Y5Q9 886 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 SNX11Q9Y5W9 270 aa7.24□□□□□ -1.25
COPS3-202ENST00000417352 TBC1D3DA0A087WVF3 549 aa7.23□□□□□ -1.25
COPS3-202ENST00000417352 TBC1D3IA0A087WXS9 549 aa7.23□□□□□ -1.25
COPS3-202ENST00000417352 TBC1D3EA0A087X179 549 aa7.23□□□□□ -1.25
COPS3-202ENST00000417352 TBC1D3KA0A087X1G2 549 aa7.23□□□□□ -1.25
COPS3-202ENST00000417352 FAM170AA1A519 330 aa7.23□□□□□ -1.25
COPS3-202ENST00000417352 BICDL2A1A5D9 508 aa7.23□□□□□ -1.25
COPS3-202ENST00000417352 TBC1D3FA6NER0 549 aaPredicted RBP7.23□□□□□ -1.25
COPS3-202ENST00000417352 UPK3BL1B0FP48 263 aa7.23□□□□□ -1.25
COPS3-202ENST00000417352 TBC1D3LB9A6J9 549 aa7.23□□□□□ -1.25
COPS3-202ENST00000417352 UPK3BL2E5RIL1 263 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms