RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 DENND2DQ9H6A0 471 aaPredicted RBP3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 MANSC1Q9H8J5 431 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 POLMQ9NP87 494 aaPredicted RBP3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 BEX4Q9NWD9 120 aaPredicted RBP3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 SIRT5Q9NXA8 310 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 GFOD1Q9NXC2 390 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 CLDND1Q9NY35 253 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 TMOD3Q9NYL9 352 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 DONSONQ9NYP3 566 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 KCND2Q9NZV8 630 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 SPATA7Q9P0W8 599 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 CLEC1BQ9P126 229 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 ANKMY1Q9P2S6 941 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 HDAC6Q9UBN7 1215 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 PRSS50Q9UI38 385 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 SLCO3A1Q9UIG8 710 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 ANAPC2Q9UJX6 822 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 USP21Q9UK80 565 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 SARDHQ9UL12 918 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 ZMYND8Q9ULU4 1186 aaPredicted RBP3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 NFU1Q9UMS0 254 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 GDAQ9Y2T3 454 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 TDRKHQ9Y2W6 561 aaKnown RBP3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 NAALAD2Q9Y3Q0 740 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 COPG1Q9Y678 874 aaKnown RBP3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 CDY2AQ9Y6F7 541 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 WASF2Q9Y6W5 498 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 COMMD3-BMI1R4GMX3 469 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 SPACA6W5XKT8 324 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 PLEKHG2Q9H7P9 1386 aa3.25□□□□□ -1.89
CTDSPL-203ENST00000416688 SYNGAP1Q96PV0 1343 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 A0A1B0GWJ7 208 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 HTR3EA5X5Y0 456 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RSPH10B2B2RC85 870 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 EIF3CLB5ME19 914 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 HSBP1L1C9JCN9 74 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 E9PI62 339 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 H0Y8X5 98 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 H0YHG0 523 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 H3BM21 787 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 GOLGA8SH3BPF8 625 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PEX12O00623 359 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MAN2B1O00754 1011 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 KCNK3O14649 394 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ATXN7O15265 892 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 NVLO15381 856 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CLDN3O15551 220 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 EFSO43281 561 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SIGLEC6O43699 453 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SSX5O60225 188 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MTX2O75431 263 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TADA2AO75478 443 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PSMD10O75832 226 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RHOBTB1O94844 696 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PRPF6O94906 941 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 AKR7A3O95154 331 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ZIC2O95409 532 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MATN4O95460 622 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 DIRAS3O95661 229 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MT-ATP6P00846 226 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ALBP02768 609 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CSF2P04141 144 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 AMY2AP04746 511 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MMP2P08253 660 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CYC1P08574 325 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 WEE2P0C1S8 567 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RSPH10BP0C881 870 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 NCF1P14598 390 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ETS1P14921 441 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 AMY2BP19961 511 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ACAT1P24752 427 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SDHAP31040 664 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CSTF2P33240 577 aaKnown RBP eCLIP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ETV3P41162 512 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SLC15A1P46059 708 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CCR10P46092 362 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 NR2C2P49116 596 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 GPR15P49685 360 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RAB28P51157 221 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SLC8A3P57103 927 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CARD18P57730 90 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RPL11P62913 178 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TUBA1BP68363 451 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RBM6P78332 1123 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ADAM17P78536 824 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ID3Q02535 119 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ITIH3Q06033 890 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PPARAQ07869 468 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SF3A3Q12874 501 aaKnown RBP eCLIP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ABRQ12979 859 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 IL24Q13007 206 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 DNAJC3Q13217 504 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TUSC3Q13454 348 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CUL1Q13616 776 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TUBA3CQ13748 450 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 LBRQ14739 615 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 NOMO1Q15155 1222 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CHRNA2Q15822 529 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms