RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 SLFN11Q7Z7L1 901 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 PSTKQ8IV42 348 aaKnown RBP15.11■□□□□ 0.01
LIMS1-206ENST00000414829 CHPFQ8IZ52 775 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 CARNMT1Q8N4J0 409 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 TC2NQ8N9U0 490 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 CIPCQ9C0C6 399 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 SIK2Q9H0K1 926 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 THAP2Q9H0W7 228 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 OSBPL2Q9H1P3 480 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 ABCB8Q9NUT2 735 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 CALCOCO1Q9P1Z2 691 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 STIM2Q9P246 746 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 MYO1AQ9UBC5 1043 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 PPARGC1AQ9UBK2 798 aaKnown RBP15.11■□□□□ 0.01
LIMS1-206ENST00000414829 IP6K2Q9UHH9 426 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 INTUQ9ULD6 942 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 VANGL2Q9ULK5 521 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 PCDHGA2Q9Y5H1 932 aa15.11■□□□□ 0.01
LIMS1-206ENST00000414829 E9PAM4 449 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 MYO1FO00160 1098 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 PRPSAP2O60256 369 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 GJB6O95452 261 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 APBB3O95704 486 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 TMEM253P0C7T8 217 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 HNRNPLP14866 589 aaKnown RBP eCLIP15.1■□□□□ 0.01
LIMS1-206ENST00000414829 HLA-FP30511 346 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 NTSR1P30989 418 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 PCK1P35558 622 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 ETFBP38117 255 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 GALCP54803 685 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 GSDMDP57764 484 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 SULT2A1Q06520 285 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 STARD3Q14849 445 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 C5orf22Q49AR2 442 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 C2orf27AQ580R0 203 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 C6orf118Q5T5N4 469 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 SETD3Q86TU7 594 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-206ENST00000414829 TMTC1Q8IUR5 882 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 RHOT2Q8IXI1 618 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 CCAR2Q8N163 923 aaKnown RBP15.1■□□□□ 0.01
LIMS1-206ENST00000414829 TXLNBQ8N3L3 684 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 NIPA2Q8N8Q9 360 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 EZH1Q92800 747 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-206ENST00000414829 EPAS1Q99814 870 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 NUP85Q9BW27 656 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 ADAM33Q9BZ11 813 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 ZYG11BQ9C0D3 744 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 POLMQ9NP87 494 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-206ENST00000414829 ELOVL2Q9NXB9 296 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 ANAPC7Q9UJX3 599 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 NENFQ9UMX5 172 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 PLA2G4CQ9UP65 541 aa15.1■□□□□ 0.01
LIMS1-206ENST00000414829 ZNF318Q5VUA4 2279 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 IGLV3-10A0A075B6K4 115 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 KLF8O95600 359 aaPredicted RBP15.09■□□□□ 0.01
LIMS1-206ENST00000414829 DLDP09622 509 aaKnown RBP15.09■□□□□ 0.01
LIMS1-206ENST00000414829 POLR2EP19388 210 aaKnown RBP15.09■□□□□ 0.01
LIMS1-206ENST00000414829 TIE1P35590 1138 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 SGSHP51688 502 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 ST8SIA6P61647 398 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 SATB1Q01826 763 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 CSTF1Q05048 431 aaKnown RBP15.09■□□□□ 0.01
LIMS1-206ENST00000414829 GAS6Q14393 721 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 GEN1Q17RS7 908 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 RNF219Q5W0B1 726 aaPredicted RBP15.09■□□□□ 0.01
LIMS1-206ENST00000414829 SCYL2Q6P3W7 929 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 ZNF783Q6ZMS7 281 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 KIAA0907Q7Z7F0 614 aaPredicted RBP15.09■□□□□ 0.01
LIMS1-206ENST00000414829 CFAP52Q8N1V2 620 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 IL17RCQ8NAC3 791 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 KDM1BQ8NB78 822 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 PRSS33Q8NF86 280 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 TSTD1Q8NFU3 115 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 ZNF564Q8TBZ8 553 aaPredicted RBP15.09■□□□□ 0.01
LIMS1-206ENST00000414829 TBC1D31Q96DN5 1066 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 SEMA4AQ9H3S1 761 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 FBRSQ9HAH7 460 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 ZSCAN32Q9NX65 697 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 CTTNBP2NLQ9P2B4 639 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 OR12D3Q9UGF7 316 aa15.09■□□□□ 0.01
LIMS1-206ENST00000414829 MIA3Q5JRA6 1907 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 DRGXA6NNA5 263 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 PRRT4C9JH25 899 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 SP9P0CG40 484 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 HOXB2P14652 356 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 FECHP22830 423 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 L1CAMP32004 1257 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 CNR2P34972 360 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 NNMTP40261 264 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 MAPKAPK2P49137 400 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 ATXN1P54253 815 aaKnown RBP15.08■□□□□ 0
LIMS1-206ENST00000414829 MESP2Q0VG99 397 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 TCF15Q12870 199 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 CRY1Q16526 586 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 ALLCQ8N6M5 410 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 TXNDC5Q8NBS9 432 aaKnown RBP15.08■□□□□ 0
LIMS1-206ENST00000414829 ATRIPQ8WXE1 791 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 RFFLQ8WZ73 363 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 CHP1Q99653 195 aa15.08■□□□□ 0
LIMS1-206ENST00000414829 THAP10Q9P2Z0 257 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms