RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 H0Y626 953 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 BCAT2O15382 392 aaPredicted RBP16.09■□□□□ 0.17
ACTB-202ENST00000414620 SIN3BO75182 1162 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 IGLV3-25P01717 112 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 C1QTNF9P0C862 333 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 CTSOP43234 321 aaPredicted RBP16.09■□□□□ 0.17
ACTB-202ENST00000414620 ST8SIA6P61647 398 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 YWHAZP63104 245 aaKnown RBP16.09■□□□□ 0.17
ACTB-202ENST00000414620 DPCR1Q3MIW9 517 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 PITRM1Q5JRX3 1037 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 FAM183BPQ6ZVS7 135 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 DHX40Q8IX18 779 aaKnown RBP16.09■□□□□ 0.17
ACTB-202ENST00000414620 WDTC1Q8N5D0 677 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 ZNF557Q8N988 423 aaPredicted RBP16.09■□□□□ 0.17
ACTB-202ENST00000414620 MLKLQ8NB16 471 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 SHC3Q92529 594 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 FAM81BQ96LP2 452 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 SCNM1Q9BWG6 230 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 IRX2Q9BZI1 471 aaPredicted RBP16.09■□□□□ 0.17
ACTB-202ENST00000414620 CLSTN2Q9H4D0 955 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 THAP9Q9H5L6 903 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 IL21RQ9HBE5 538 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 PLCB1Q9NQ66 1216 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 SUN2Q9UH99 717 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 DNAJC12Q9UKB3 198 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 CEP83Q9Y592 693 aa16.09■□□□□ 0.17
ACTB-202ENST00000414620 F5H5T6 163 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 HYAL3O43820 417 aaPredicted RBP16.08■□□□□ 0.16
ACTB-202ENST00000414620 SH3BP5O60239 455 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 GJB3O75712 270 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 SEMA4FO95754 770 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 PRKCSHP14314 528 aaPredicted RBP16.08■□□□□ 0.16
ACTB-202ENST00000414620 MAN2A1Q16706 1144 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.16
ACTB-202ENST00000414620 ZNF776Q68DI1 518 aaPredicted RBP16.08■□□□□ 0.16
ACTB-202ENST00000414620 OR6B2Q6IFH4 312 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 BEND5Q7L4P6 421 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 APCDD1Q8J025 514 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 ATP6V0D2Q8N8Y2 350 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 GANCQ8TET4 914 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 TTC17Q96AE7 1141 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 PPP1R13BQ96KQ4 1090 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 BTN2A3PQ96KV6 586 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 MRGPRX3Q96LB0 322 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 ADAM33Q9BZ11 813 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 BTBD1Q9H0C5 482 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 DDIT4Q9NX09 232 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 WASF3Q9UPY6 502 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 ERVW-1Q9UQF0 538 aa16.08■□□□□ 0.16
ACTB-202ENST00000414620 DOCK9Q9BZ29 2069 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 A0A1B0GVT2 93 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 GTPBP10A4D1E9 387 aaKnown RBP16.07■□□□□ 0.16
ACTB-202ENST00000414620 TTC34A8MYJ7 566 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 UPK3BL1B0FP48 263 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 UPK3BL2E5RIL1 263 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 FSBPO95073 299 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 MOCS3O95396 460 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 ASLP04424 464 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 ERBB2P04626 1255 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 GGCXP38435 758 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 CDK17Q00537 523 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 BNC1Q01954 994 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 PTK2Q05397 1052 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 LAYNQ6UX15 382 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 UNQ6494/PRO21346Q6UXR6 183 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 SLC47A2Q86VL8 602 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 RNF34Q969K3 372 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 RPL10LQ96L21 214 aaKnown RBP16.07■□□□□ 0.16
ACTB-202ENST00000414620 GAREM1Q9H706 876 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 FBRSQ9HAH7 460 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 KIAA1522Q9P206 1035 aaPredicted RBP16.07■□□□□ 0.16
ACTB-202ENST00000414620 PCDHGC3Q9UN70 934 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 NFE2L3Q9Y4A8 694 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 PTPRBP23467 1997 aa16.07■□□□□ 0.16
ACTB-202ENST00000414620 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 HSF2BPO75031 334 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 PDGFRAP16234 1089 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 CLCN1P35523 988 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 MATKP42679 507 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 CSNK1EP49674 416 aaKnown RBP16.06■□□□□ 0.16
ACTB-202ENST00000414620 STK19P49842 368 aaPredicted RBP16.06■□□□□ 0.16
ACTB-202ENST00000414620 CENPCQ03188 943 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 NME3Q13232 169 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 HNRNPA1L2Q32P51 320 aaKnown RBP16.06■□□□□ 0.16
ACTB-202ENST00000414620 PTPN20Q4JDL3 420 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 C11orf57Q6ZUT1 292 aaPredicted RBP16.06■□□□□ 0.16
ACTB-202ENST00000414620 NAXDQ8IW45 347 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 FAM114A1Q8IWE2 563 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 BIRC7Q96CA5 298 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 SLC2A13Q96QE2 648 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 ZDHHC5Q9C0B5 715 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 RSPH9Q9H1X1 276 aaPredicted RBP16.06■□□□□ 0.16
ACTB-202ENST00000414620 PABPC3Q9H361 631 aaKnown RBP16.06■□□□□ 0.16
ACTB-202ENST00000414620 SYNCQ9H7C4 482 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.06■□□□□ 0.163e-20■■■■□ 20.1
ACTB-202ENST00000414620 SERGEFQ9UGK8 458 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 KLK13Q9UKR3 277 aa16.06■□□□□ 0.16
ACTB-202ENST00000414620 FNDC3AQ9Y2H6 1198 aaKnown RBP16.06■□□□□ 0.16
ACTB-202ENST00000414620 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.06■□□□□ 0.16
ACTB-202ENST00000414620 DOCK4Q8N1I0 1966 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms