RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 OR12D3Q9UGF7 316 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 VANGL2Q9ULK5 521 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 FZD10Q9ULW2 581 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 CLEC4EQ9ULY5 219 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 PCDHA13Q9Y5I0 950 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 KIAA1549LQ6ZVL6 1849 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 E9PAM4 449 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 TRIM24O15164 1050 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 TIMM44O43615 452 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 ATG13O75143 517 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 LRCH4O75427 683 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 CLDN11O75508 207 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 MIPP30301 263 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 ARHGAP25P42331 645 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 CDH4P55283 916 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 OXCT1P55809 520 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 MRPS21P82921 87 aaKnown RBP17■□□□□ 0.31
LINC00398-201ENST00000414407 EIF4HQ15056 248 aaKnown RBP17■□□□□ 0.31
LINC00398-201ENST00000414407 ARTNQ5T4W7 220 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 RAD9BQ6WBX8 426 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 ANKS1BQ7Z6G8 1248 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 C14orf80Q86SX3 495 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 CFAP52Q8N1V2 620 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 SPEM1Q8N4L4 309 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 SLC35G2Q8TBE7 412 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 WFIKKN2Q8TEU8 576 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 STIM2Q9P246 746 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 MIA3Q5JRA6 1907 aa17■□□□□ 0.31
LINC00398-201ENST00000414407 H0Y626 953 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 PRPSAP2O60256 369 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 RNF40O75150 1001 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 HLA-FP30511 346 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 L1CAMP32004 1257 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 HTR7P34969 479 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 KIR2DL1P43626 348 aaPredicted RBP16.99■□□□□ 0.31
LINC00398-201ENST00000414407 HADHBP55084 474 aaKnown RBP16.99■□□□□ 0.31
LINC00398-201ENST00000414407 SLC12A1Q13621 1099 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 CDH18Q13634 790 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 BOLA3Q53S33 107 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 ERMARDQ5T6L9 678 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 MANEALQ5VSG8 457 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 AHI1Q8N157 1196 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 CCAR2Q8N163 923 aaKnown RBP16.99■□□□□ 0.31
LINC00398-201ENST00000414407 DTWD2Q8NBA8 298 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 CCDC112Q8NEF3 446 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 USP33Q8TEY7 942 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 LMLNQ96KR4 655 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 PPP1R9BQ96SB3 815 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 PRRX2Q99811 253 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 OSGEPQ9NPF4 335 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 KIAA1522Q9P206 1035 aaPredicted RBP16.99■□□□□ 0.31
LINC00398-201ENST00000414407 GGA2Q9UJY4 613 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 USP18Q9UMW8 372 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 ZDBF2Q9HCK1 2354 aa16.99■□□□□ 0.31
LINC00398-201ENST00000414407 A0A0A6YYK5 440 aaPredicted RBP16.98■□□□□ 0.31
LINC00398-201ENST00000414407 PRRT4C9JH25 899 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 NPC1O15118 1278 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 PROSCO94903 275 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 CHRM1P11229 460 aaPredicted RBP16.98■□□□□ 0.31
LINC00398-201ENST00000414407 PABPC1P11940 636 aaKnown RBP16.98■□□□□ 0.31
LINC00398-201ENST00000414407 MAN1A1P33908 653 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 GGCXP38435 758 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 ZNF135P52742 658 aaPredicted RBP16.98■□□□□ 0.31
LINC00398-201ENST00000414407 KRT83P78385 493 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 MTAPQ13126 283 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 GAS6Q14393 721 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 DMC1Q14565 340 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 GEN1Q17RS7 908 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 Q6ZS52 159 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 TRMT11Q7Z4G4 463 aaKnown RBP16.98■□□□□ 0.31
LINC00398-201ENST00000414407 TXLNBQ8N3L3 684 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 CARNMT1Q8N4J0 409 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 WFDC5Q8TCV5 224 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 UCMAQ8WVF2 138 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 ANP32BQ92688 251 aaKnown RBP16.98■□□□□ 0.31
LINC00398-201ENST00000414407 ACDQ96AP0 544 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 BTBD6Q96KE9 485 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 CALR3Q96L12 384 aaKnown RBP16.98■□□□□ 0.31
LINC00398-201ENST00000414407 ZYG11BQ9C0D3 744 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 ABCB8Q9NUT2 735 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 TBC1D30Q9Y2I9 924 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 SNX10Q9Y5X0 201 aa16.98■□□□□ 0.31
LINC00398-201ENST00000414407 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.97■□□□□ 0.31
LINC00398-201ENST00000414407 BTNL10A8MVZ5 291 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 SRGAP2O75044 1071 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 LRIG2O94898 1065 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 PAPSS2O95340 614 aaPredicted RBP16.97■□□□□ 0.31
LINC00398-201ENST00000414407 HNRNPLP14866 589 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC00398-201ENST00000414407 HOXC13P31276 330 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 CCR3P51677 355 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 PLK1P53350 603 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 LMAN2Q12907 356 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 SEMA3BQ13214 749 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 ZNF177Q13360 481 aaPredicted RBP16.97■□□□□ 0.31
LINC00398-201ENST00000414407 GSE1Q14687 1217 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 HADHQ16836 314 aaKnown RBP16.97■□□□□ 0.31
LINC00398-201ENST00000414407 CYP4V2Q6ZWL3 525 aaPredicted RBP16.97■□□□□ 0.31
LINC00398-201ENST00000414407 SETD3Q86TU7 594 aaPredicted RBP16.97■□□□□ 0.31
LINC00398-201ENST00000414407 ADIPOR2Q86V24 386 aa16.97■□□□□ 0.31
LINC00398-201ENST00000414407 C1orf210Q8IVY1 113 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms