RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PXNP49023 591 aaPredicted RBP15.18■□□□□ 0.02
CHD1-202ENST00000414220 MRE11P49959 708 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 SGSHP51688 502 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 ZNF143P52747 638 aaPredicted RBP15.18■□□□□ 0.02
CHD1-202ENST00000414220 CDH4P55283 916 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 SULT2A1Q06520 285 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 CCDC14Q49A88 953 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 FNDC3BQ53EP0 1204 aaKnown RBP15.18■□□□□ 0.02
CHD1-202ENST00000414220 MBLAC2Q68D91 279 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 SARM1Q6SZW1 724 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 SERPINA13PQ6UXR4 307 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 FAM131BQ86XD5 332 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 CNGA4Q8IV77 575 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 VSTM4Q8IW00 320 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 CCAR2Q8N163 923 aaKnown RBP15.18■□□□□ 0.02
CHD1-202ENST00000414220 JOSD2Q8TAC2 188 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 FAM172AQ8WUF8 416 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 SPACA7Q96KW9 195 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 MCEEQ96PE7 176 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 PRMT1Q99873 361 aaKnown RBP15.18■□□□□ 0.02
CHD1-202ENST00000414220 GABRG3Q99928 467 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 HINFPQ9BQA5 517 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 EPC1Q9H2F5 836 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 C2orf42Q9NWW7 574 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 CNOT8Q9UFF9 292 aaKnown RBP15.18■□□□□ 0.02
CHD1-202ENST00000414220 SUN2Q9UH99 717 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 STON1Q9Y6Q2 735 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 CACNA1IQ9P0X4 2223 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 MUC6Q6W4X9 2439 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 MYOFQ9NZM1 2061 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 DDX3XO00571 662 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHD1-202ENST00000414220 ADAM23O75077 832 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 RNF8O76064 485 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 DLDP09622 509 aaKnown RBP15.17■□□□□ 0.02
CHD1-202ENST00000414220 AIF1P55008 147 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 LMAN2Q12907 356 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 ZNF234Q14588 700 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 C15orf59Q2T9L4 293 aaPredicted RBP15.17■□□□□ 0.02
CHD1-202ENST00000414220 RNF43Q68DV7 783 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 SCYL2Q6P3W7 929 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 TMEM92Q6UXU6 159 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 KIAA0907Q7Z7F0 614 aaPredicted RBP15.17■□□□□ 0.02
CHD1-202ENST00000414220 ALYREFQ86V81 257 aaKnown RBP15.17■□□□□ 0.02
CHD1-202ENST00000414220 RASSF3Q86WH2 238 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 GAB3Q8WWW8 586 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 ZNF653Q96CK0 615 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 CNPY3Q9BT09 278 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 RETREG1Q9H6L5 497 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 ZDHHC4Q9NPG8 344 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 CACNA2D2Q9NY47 1150 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 TAS2R14Q9NYV8 317 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 NCDNQ9UBB6 729 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 GMEB2Q9UKD1 530 aa15.17■□□□□ 0.02
CHD1-202ENST00000414220 PRR23AA6NEV1 266 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 SRGAP2O75044 1071 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 ZNF217O75362 1048 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 EPHX1P07099 455 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 TFE3P19532 575 aaPredicted RBP15.16■□□□□ 0.02
CHD1-202ENST00000414220 HNRNPH3P31942 346 aaKnown RBP15.16■□□□□ 0.02
CHD1-202ENST00000414220 CD70P32970 193 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 ADRA1BP35368 520 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 DMWDQ09019 674 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 MAMLD1Q13495 774 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 C5orf22Q49AR2 442 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 EFHC2Q5JST6 749 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 CCDC122Q5T0U0 273 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 C6orf118Q5T5N4 469 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 OTUD1Q5VV17 481 aaPredicted RBP15.16■□□□□ 0.02
CHD1-202ENST00000414220 E4F1Q66K89 784 aaPredicted RBP15.16■□□□□ 0.02
CHD1-202ENST00000414220 HGSNATQ68CP4 663 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 PLEKHA7Q6IQ23 1121 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 BNIPLQ7Z465 357 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.16■□□□□ 0.02
CHD1-202ENST00000414220 SLFN11Q7Z7L1 901 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 ADIPOR2Q86V24 386 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 KDM1BQ8NB78 822 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 HMGB4Q8WW32 186 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 CENPIQ92674 756 aaPredicted RBP15.16■□□□□ 0.02
CHD1-202ENST00000414220 NTAN1Q96AB6 310 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 P2RY11Q96G91 374 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 ACOX2Q99424 681 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 PHOX2BQ99453 314 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 ISCUQ9H1K1 167 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 CALCOCO1Q9P1Z2 691 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 MYO1AQ9UBC5 1043 aa15.16■□□□□ 0.02
CHD1-202ENST00000414220 SMG5Q9UPR3 1016 aaKnown RBP15.16■□□□□ 0.02
CHD1-202ENST00000414220 DRGXA6NNA5 263 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 AKR1B15C9JRZ8 316 aaPredicted RBP15.15■□□□□ 0.02
CHD1-202ENST00000414220 E9PAM4 449 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 MAP3K13O43283 966 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 HRO43593 1189 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 AKR1B10O60218 316 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 RHOBTB1O94844 696 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 GJB6O95452 261 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 SRPRAP08240 638 aaKnown RBP15.15■□□□□ 0.02
CHD1-202ENST00000414220 PSMA2P25787 234 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 CSKP41240 450 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 IL12RB1P42701 662 aa15.15■□□□□ 0.02
CHD1-202ENST00000414220 ATXN1P54253 815 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms