RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 POLR2EP19388 210 aaKnown RBP9.94□□□□□ -0.82
RFFL-203ENST00000413582 RXRGP48443 463 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 HARS2P49590 506 aaKnown RBP9.94□□□□□ -0.82
RFFL-203ENST00000413582 CCR5P51681 352 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 CST6Q15828 149 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 HNRNPA1L2Q32P51 320 aaKnown RBP9.94□□□□□ -0.82
RFFL-203ENST00000413582 PROX2Q3B8N5 592 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 TAF1BQ53T94 588 aaPredicted RBP9.94□□□□□ -0.82
RFFL-203ENST00000413582 ADGRF1Q5T601 910 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 PM20D1Q6GTS8 502 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 SHC4Q6S5L8 630 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 OR2T34Q8NGX1 318 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 TAS1R2Q8TE23 839 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 GANCQ8TET4 914 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 NDRG1Q92597 394 aaKnown RBP9.94□□□□□ -0.82
RFFL-203ENST00000413582 TMA16Q96EY4 203 aaKnown RBP9.94□□□□□ -0.82
RFFL-203ENST00000413582 WBP1Q96G27 269 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 HIC2Q96JB3 615 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 LMLNQ96KR4 655 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 LGMNQ99538 433 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 ULBP1Q9BZM6 244 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 IMPG2Q9BZV3 1241 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 NEUROG2Q9H2A3 272 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 KCTD10Q9H3F6 313 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 OLA1Q9NTK5 396 aaKnown RBP9.94□□□□□ -0.82
RFFL-203ENST00000413582 LMBRD1Q9NUN5 540 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 SUN2Q9UH99 717 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 ADAMTS1Q9UHI8 967 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 FZD4Q9ULV1 537 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 PCDHA7Q9UN72 937 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 HBS1LQ9Y450 684 aaKnown RBP9.94□□□□□ -0.82
RFFL-203ENST00000413582 MSI1O43347 362 aaKnown RBP9.93□□□□□ -0.82
RFFL-203ENST00000413582 LATO43561 262 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 CUTAO60888 179 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 RNASEH2AO75792 299 aaKnown RBP9.93□□□□□ -0.82
RFFL-203ENST00000413582 MBD3O95983 291 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 ZBED1O96006 694 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 SLFN14P0C7P3 912 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 TRIM49P0CI25 452 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 TRIM49CP0CI26 452 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 ACP1P24666 158 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 TKTL1P51854 596 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 ADPRHP54922 357 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 PCBP4P57723 403 aaKnown RBP9.93□□□□□ -0.82
RFFL-203ENST00000413582 TMPRSS3P57727 454 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 UBE2HP62256 183 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 PPP2CBP62714 309 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 PPP2CAP67775 309 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 RHDQ02161 417 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 PPP3CAQ08209 521 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 BNIP3Q12983 259 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 CUL4BQ13620 913 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 ARID5BQ14865 1188 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 PKDCCQ504Y2 493 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 ZNF394Q53GI3 561 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 MPP7Q5T2T1 576 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 ARHGAP17Q68EM7 881 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 SPATS2Q86XZ4 545 aaKnown RBP9.93□□□□□ -0.82
RFFL-203ENST00000413582 MMAAQ8IVH4 418 aaKnown RBP9.93□□□□□ -0.82
RFFL-203ENST00000413582 DHX40Q8IX18 779 aaKnown RBP9.93□□□□□ -0.82
RFFL-203ENST00000413582 OXR1Q8N573 874 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 AADATQ8N5Z0 425 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 SLC4A11Q8NBS3 891 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 ZNF248Q8NDW4 579 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 TTC17Q96AE7 1141 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 SERAC1Q96JX3 654 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 MRGPRX3Q96LB0 322 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 UBXN6Q9BZV1 441 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 CLMPQ9H6B4 373 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 ERVMER34-1Q9H9K5 563 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 SFMBT1Q9UHJ3 866 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 PCDHB1Q9Y5F3 818 aa9.93□□□□□ -0.82
RFFL-203ENST00000413582 TDRD6O60522 2096 aaKnown RBP9.93□□□□□ -0.82
RFFL-203ENST00000413582 A0A1W2PQ27 194 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 A0A1W2PQ64 194 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 GOLGA6L4A6NEF3 574 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 PYCARD-AS1I3L0S3 204 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 TLR4O00206 839 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 TULP2O00295 520 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 POLR2DO15514 142 aaKnown RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 KLRC4O43908 158 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 TBL1XO60907 577 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 RNASEH1O60930 286 aaKnown RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 MT-CO3P00414 261 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 IGLV3-27P01718 113 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 SLC6A4P31645 630 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 CSKP41240 450 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 ME1P48163 572 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 GCLMP48507 274 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 VAMP7P51809 220 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 UCNP55089 124 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 ST8SIA6P61647 398 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 STK4Q13043 487 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 FAM133BQ5BKY9 247 aaKnown RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 C9orf64Q5T6V5 341 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 PIK3R6Q5UE93 754 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 CEP135Q66GS9 1140 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 NAPEPLDQ6IQ20 393 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 RFWD3Q6PCD5 774 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 KDM7AQ6ZMT4 941 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms