RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ASLP04424 464 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CSKP41240 450 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SFSWAPQ12872 951 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 HNRNPA1L2Q32P51 320 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PKDCCQ504Y2 493 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PMF1Q6P1K2 205 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 NCEH1Q6PIU2 408 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 LCLAT1Q6UWP7 414 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 TMPRSS12Q86WS5 348 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CARNMT1Q8N4J0 409 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 UBR7Q8N806 425 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 HJURPQ8NCD3 748 aaPredicted RBP14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SLC35F5Q8WV83 523 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 IRGQQ8WZA9 623 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 TFAP2BQ92481 460 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 AZIN2Q96A70 460 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SKA1Q96BD8 255 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CRELD1Q96HD1 420 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 LMLNQ96KR4 655 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 DCBLD2Q96PD2 775 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 NEUROG2Q9H2A3 272 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 EBF2Q9HAK2 575 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 AASDHPPTQ9NRN7 309 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SERGEFQ9UGK8 458 aa14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 INTS6Q9UL03 887 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB2-229ENST00000411527 COL5A1P20908 1838 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 IGSF10Q6WRI0 2623 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 A0A087WV48 116 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 A0A1W2PP55 124 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 TYW5A2RUC4 315 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 LRRC72A6NJI9 287 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PLK4O00444 970 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 MID1O15344 667 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 RNASEH2AO75792 299 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 LDOC1O95751 146 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 LTFP02788 710 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 WNT1P04628 370 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ITGAVP06756 1048 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ABCB4P21439 1286 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 PRCPP42785 496 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 RPS24P62847 133 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CST6Q15828 149 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 NADSYN1Q6IA69 706 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 TMEM270Q6UE05 265 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 MMAAQ8IVH4 418 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CCDC117Q8IWD4 279 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 CLEC4CQ8WTT0 213 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 MRGPRX3Q96LB0 322 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ELF4Q99607 663 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 OMDQ99983 421 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 DDX50Q9BQ39 737 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 GOLPH3LQ9H4A5 285 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 ERVW-1Q9UQF0 538 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 SHROOM3Q8TF72 1996 aa14.78□□□□□ -0.04
HLA-DQB2-229ENST00000411527 A0A1W2PQ27 194 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 A0A1W2PQ64 194 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TTC34A8MYJ7 566 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 E9PAM4 449 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CBX4O00257 560 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 ENC1O14682 589 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 SLC16A3O15427 465 aaKnown RBP14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PAEPP09466 180 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 JUPP14923 745 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TBXAS1P24557 533 aaPredicted RBP14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CD38P28907 300 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 SLC8A1P32418 973 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CTSOP43234 321 aaPredicted RBP14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CLDN6P56747 220 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 DNAJC3Q13217 504 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CDH18Q13634 790 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 KCNJ12Q14500 433 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 FSCBQ5H9T9 825 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 C9orf64Q5T6V5 341 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 MMS22LQ6ZRQ5 1243 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CFAP52Q8N1V2 620 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 OR2T34Q8NGX1 318 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 MYEOVQ96EZ4 313 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CNDP2Q96KP4 475 aaKnown RBP14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PRICKLE1Q96MT3 831 aaPredicted RBP14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TSG101Q99816 390 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 MIS12Q9H081 205 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 ADAMTS1Q9UHI8 967 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 ZDHHC9Q9Y397 364 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PCDHB4Q9Y5E5 795 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PCDHGA1Q9Y5H4 931 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 KNTC1P50748 2209 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 LOC400499M0QZD8 3231 aa14.77□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TARSL2A2RTX5 802 aaKnown RBP14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 M0QYV0 167 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 WNT9AO14904 365 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 HNF1BP35680 557 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 FKBP3Q00688 224 aaKnown RBP14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PNOCQ13519 176 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 ARID5BQ14865 1188 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 SHBQ15464 509 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CNGA2Q16280 664 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 MS4A13Q5J8X5 152 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PITRM1Q5JRX3 1037 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 ANKRD40Q6AI12 368 aa14.76□□□□□ -0.05
HLA-DQB2-229ENST00000411527 EID2Q8N6I1 236 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms