RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ATP6V0D2Q8N8Y2 350 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 SLC20A1Q8WUM9 679 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 CPA5Q8WXQ8 436 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 RNF34Q969K3 372 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 C18orf8Q96DM3 657 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 NLRC4Q9NPP4 1024 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 ITM2CQ9NQX7 267 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 USP36Q9P275 1121 aaKnown RBP18.32■□□□□ 0.52
LSM5-204ENST00000409909 PILRBQ9UKJ0 227 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 ATXN2Q99700 1313 aaKnown RBP18.31■□□□□ 0.52
LSM5-204ENST00000409909 TYW5A2RUC4 315 aaKnown RBP18.31■□□□□ 0.52
LSM5-204ENST00000409909 LGALS16A8MUM7 142 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 M0QYT0 321 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 KHNYNO15037 678 aaKnown RBP18.31■□□□□ 0.52
LSM5-204ENST00000409909 LSM8O95777 96 aaKnown RBP18.31■□□□□ 0.52
LSM5-204ENST00000409909 ATP5BP06576 529 aaKnown RBP18.31■□□□□ 0.52
LSM5-204ENST00000409909 SLC2A3P11169 496 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 CHRNB2P17787 502 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 ABCB4P21439 1286 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 CSKP41240 450 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 MATKP42679 507 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 TPMTP51580 245 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 RNASE9P60153 205 aaKnown RBP18.31■□□□□ 0.52
LSM5-204ENST00000409909 NOMO3P69849 1222 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 ZNF33AQ06730 810 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 CDH18Q13634 790 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 ZNF557Q8N988 423 aaPredicted RBP18.31■□□□□ 0.52
LSM5-204ENST00000409909 NT5C3BQ969T7 300 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 SIPA1Q96FS4 1042 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 MYO19Q96H55 970 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 NPY6RQ99463 290 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 PIGVQ9NUD9 493 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 SLC12A6Q9UHW9 1150 aa18.31■□□□□ 0.52
LSM5-204ENST00000409909 F5H5T6 163 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 ATP1A3P13637 1013 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 CD6P30203 668 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 SOX5P35711 763 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 CTSOP43234 321 aaPredicted RBP18.3■□□□□ 0.52
LSM5-204ENST00000409909 PITRM1Q5JRX3 1037 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 PEAR1Q5VY43 1037 aaPredicted RBP18.3■□□□□ 0.52
LSM5-204ENST00000409909 NAA35Q5VZE5 725 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 FBXL22Q6P050 247 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 CIR1Q86X95 450 aaPredicted RBP18.3■□□□□ 0.52
LSM5-204ENST00000409909 CACUL1Q86Y37 369 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 AOPEPQ8N6M6 819 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 OR2T3Q8NH03 318 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 PRCCQ92733 491 aaPredicted RBP18.3■□□□□ 0.52
LSM5-204ENST00000409909 TOE1Q96GM8 510 aaKnown RBP18.3■□□□□ 0.52
LSM5-204ENST00000409909 ZNF419Q96HQ0 510 aaPredicted RBP18.3■□□□□ 0.52
LSM5-204ENST00000409909 MRGPRX3Q96LB0 322 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 EDEM2Q9BV94 578 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 MTG2Q9H4K7 406 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 PRSS16Q9NQE7 514 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 ANLNQ9NQW6 1124 aa18.3■□□□□ 0.52
LSM5-204ENST00000409909 WSB2Q9NYS7 404 aaPredicted RBP18.3■□□□□ 0.52
LSM5-204ENST00000409909 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.3■□□□□ 0.52
LSM5-204ENST00000409909 EVLQ9UI08 416 aaPredicted RBP18.3■□□□□ 0.52
LSM5-204ENST00000409909 H0Y626 953 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 I6L893 689 aaPredicted RBP18.29■□□□□ 0.52
LSM5-204ENST00000409909 NDUFS2O75306 463 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 ADCY5O95622 1261 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 C7P10643 843 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 CDK11BP21127 795 aaKnown RBP18.29■□□□□ 0.52
LSM5-204ENST00000409909 SCNN1AP37088 669 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 CXCR3P49682 368 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 FMO1Q01740 532 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 CDR2Q01850 454 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 UBXN1Q04323 297 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 AUHQ13825 339 aaKnown RBP18.29■□□□□ 0.52
LSM5-204ENST00000409909 ANO6Q4KMQ2 910 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 TRIM61Q5EBN2 209 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 FAM102AQ5T9C2 384 aaPredicted RBP18.29■□□□□ 0.52
LSM5-204ENST00000409909 TRNP1Q6NT89 227 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 ZNF677Q86XU0 584 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 APCDD1Q8J025 514 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
LSM5-204ENST00000409909 ANKRD20A12PQ8NF67 263 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 IGSF8Q969P0 613 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 HSPA12BQ96MM6 686 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 ERGIC2Q96RQ1 377 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 KIAA1522Q9P206 1035 aaPredicted RBP18.29■□□□□ 0.52
LSM5-204ENST00000409909 HS3ST4Q9Y661 456 aa18.29■□□□□ 0.52
LSM5-204ENST00000409909 C4orf47A7E2U8 309 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 GOLGA8SH3BPF8 625 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 CDX4O14627 284 aaPredicted RBP18.28■□□□□ 0.52
LSM5-204ENST00000409909 PAGE1O75459 146 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 IGLV3-19P01714 112 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 CYP1A1P04798 512 aaPredicted RBP18.28■□□□□ 0.52
LSM5-204ENST00000409909 FLT3P36888 993 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 GGCXP38435 758 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 IRAK1P51617 712 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 CENPCQ03188 943 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 IL31Q6EBC2 164 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 C14orf80Q86SX3 495 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 CCDC117Q8IWD4 279 aaPredicted RBP18.28■□□□□ 0.52
LSM5-204ENST00000409909 SPAG5Q96R06 1193 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 TBCBQ99426 244 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 RRN3Q9NYV6 651 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 TMEM59LQ9UK28 342 aa18.28■□□□□ 0.52
LSM5-204ENST00000409909 ERVW-1Q9UQF0 538 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms