RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SCAPQ12770 1279 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 ACBD5Q5T8D3 534 aaPredicted RBP23.09■■□□□ 1.29
PTCD3-203ENST00000409783 NUDT18Q6ZVK8 323 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 MFN1Q8IWA4 741 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 KCNV2Q8TDN2 545 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 RPRD1AQ96P16 312 aaPredicted RBP23.09■■□□□ 1.29
PTCD3-203ENST00000409783 ZDHHC4Q9NPG8 344 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 ABCB8Q9NUT2 735 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 GGA2Q9UJY4 613 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 FBXO4Q9UKT5 387 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 FANCMQ8IYD8 2048 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 TYW5A2RUC4 315 aaKnown RBP23.08■■□□□ 1.29
PTCD3-203ENST00000409783 K7ESF4 209 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 NRG1Q02297 640 aaPredicted RBP23.08■■□□□ 1.29
PTCD3-203ENST00000409783 LMAN2Q12907 356 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 RABGAP1LQ5R372 815 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 MANEALQ5VSG8 457 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 TTC39BQ5VTQ0 682 aaPredicted RBP23.08■■□□□ 1.29
PTCD3-203ENST00000409783 EGFLAMQ63HQ2 1017 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 SYT13Q7L8C5 426 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 ADIPOR2Q86V24 386 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 CCAR2Q8N163 923 aaKnown RBP23.08■■□□□ 1.29
PTCD3-203ENST00000409783 CARNMT1Q8N4J0 409 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 ALLCQ8N6M5 410 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 OSBPL2Q9H1P3 480 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 INTS6Q9UL03 887 aaKnown RBP23.08■■□□□ 1.29
PTCD3-203ENST00000409783 MMP17Q9ULZ9 603 aa23.08■■□□□ 1.29
PTCD3-203ENST00000409783 MUC22E2RYF6 1773 aaPredicted RBP23.08■■□□□ 1.29
PTCD3-203ENST00000409783 A0A1B0GVM2 712 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 TCAF2A6NFQ2 919 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 E9PAM4 449 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 H0Y858 1186 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 ADAM23O75077 832 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 CNTN5O94779 1100 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 PABPC1P11940 636 aaKnown RBP23.07■■□□□ 1.28
PTCD3-203ENST00000409783 HNRNPLP14866 589 aaKnown RBP eCLIP23.07■■□□□ 1.28
PTCD3-203ENST00000409783 ARL13BQ3SXY8 428 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 HSF5Q4G112 596 aaPredicted RBP23.07■■□□□ 1.28
PTCD3-203ENST00000409783 ALFQ53S48 1182 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 CXorf57Q6NSI4 855 aaKnown RBP23.07■■□□□ 1.28
PTCD3-203ENST00000409783 TSSK4Q6SA08 328 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.07■■□□□ 1.28
PTCD3-203ENST00000409783 CCDC33Q8N5R6 958 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 ZNF513Q8N8E2 541 aaPredicted RBP23.07■■□□□ 1.28
PTCD3-203ENST00000409783 ZNF557Q8N988 423 aaPredicted RBP23.07■■□□□ 1.28
PTCD3-203ENST00000409783 WFIKKN2Q8TEU8 576 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 NELL1Q92832 810 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 ACDQ96AP0 544 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 ACOX2Q99424 681 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 NUP85Q9BW27 656 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 ELOVL2Q9NXB9 296 aa23.07■■□□□ 1.28
PTCD3-203ENST00000409783 FAM72CH0Y354 149 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 SGK1O00141 431 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 LCA5LO95447 670 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 KLF8O95600 359 aaPredicted RBP23.06■■□□□ 1.28
PTCD3-203ENST00000409783 H2AFZP0C0S5 128 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 TMEM253P0C7T8 217 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 SP9P0CG40 484 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 CSTF1Q05048 431 aaKnown RBP23.06■■□□□ 1.28
PTCD3-203ENST00000409783 CDH18Q13634 790 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 EIF4HQ15056 248 aaKnown RBP23.06■■□□□ 1.28
PTCD3-203ENST00000409783 FUT11Q495W5 492 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 FAM72AQ5TYM5 149 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 FAM72DQ6L9T8 149 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 SCYL2Q6P3W7 929 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 CYP4V2Q6ZWL3 525 aaPredicted RBP23.06■■□□□ 1.28
PTCD3-203ENST00000409783 H2AFVQ71UI9 128 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 CHST9Q7L1S5 443 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 SLFN11Q7Z7L1 901 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 FAM72BQ86X60 149 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 TXNDC5Q8NBS9 432 aaKnown RBP23.06■■□□□ 1.28
PTCD3-203ENST00000409783 OR52K2Q8NGK3 314 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 IMPACTQ9P2X3 320 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 ZNF212Q9UDV6 495 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 FZD10Q9ULW2 581 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 NEU3Q9UQ49 428 aa23.06■■□□□ 1.28
PTCD3-203ENST00000409783 ARIH1Q9Y4X5 557 aaPredicted RBP23.06■■□□□ 1.28
PTCD3-203ENST00000409783 H0Y626 953 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 LRCH4O75427 683 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 PTPN5P54829 565 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 CDH4P55283 916 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 ENPP2Q13822 863 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 DMC1Q14565 340 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 ZNF528Q3MIS6 628 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 AHI1Q8N157 1196 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 SPC24Q8NBT2 197 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 BTBD6Q96KE9 485 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 PEBP4Q96S96 227 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 MPP6Q9NZW5 540 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 THAP10Q9P2Z0 257 aaPredicted RBP23.05■■□□□ 1.28
PTCD3-203ENST00000409783 OR12D3Q9UGF7 316 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 TBC1D30Q9Y2I9 924 aa23.05■■□□□ 1.28
PTCD3-203ENST00000409783 TIMM44O43615 452 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 CLDN11O75508 207 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 HOXA6P31267 233 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 SEMA3BQ13214 749 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 ACAP1Q15027 740 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 MBLAC2Q68D91 279 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 TMEM92Q6UXU6 159 aa23.04■■□□□ 1.28
PTCD3-203ENST00000409783 LRRC31Q6UY01 552 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms