RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 CUL3Q13618 768 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 FOXR1Q6PIV2 292 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 STK32AQ8WU08 396 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 KLF6Q99612 283 aaPredicted RBP17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 TSEN34Q9BSV6 310 aaKnown RBP17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 CHADO15335 359 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 INHAP05111 366 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 RARAP10276 462 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 MSH3P20585 1137 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 SULT2A1Q06520 285 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 XRCC4Q13426 336 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 GRM3Q14832 879 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 BBS12Q6ZW61 710 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 FNIP1Q8TF40 1166 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 PAFAH2Q99487 392 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 IL22Q9GZX6 179 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 SEMA4AQ9H3S1 761 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 RUBCNLQ9H714 662 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 A0A0A0MRY4 1105 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 RNF103-CHMP3A0A140T963 221 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 TTC36A6NLP5 189 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 HNRNPRO43390 633 aaKnown RBP17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 OR56A5P0C7T3 313 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 NPAS4Q8IUM7 802 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 LPCAT1Q8NF37 534 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 SPATA13Q96N96 652 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 ASB2Q96Q27 587 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 TSR3Q9UJK0 312 aaKnown RBP17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 F8VP50 259 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 TREHO43280 583 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 TSPAN1O60635 241 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 ALDH18A1P54886 795 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 TP53BP2Q13625 1128 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 C6orf10Q5SRN2 563 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 FBXO22Q8NEZ5 403 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 DTX3LQ8TDB6 740 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 PDZD7Q9H5P4 517 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 EVA1BQ9NVM1 165 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 TAS2R13Q9NYV9 303 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 COL2A1P02458 1487 aaPredicted RBP17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 MAP3K13O43283 966 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 CYP1A1P04798 512 aaPredicted RBP17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 SERPIND1P05546 499 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 KLC1Q07866 573 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 FAM183BPQ6ZVS7 135 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 TTC30BQ8N4P2 665 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 GLIS3Q8NEA6 775 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 C7orf43Q8WVR3 580 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 CPNE1Q99829 537 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 TBL1YQ9BQ87 522 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 NXF3Q9H4D5 531 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 TMCO1Q9UM00 188 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 FAM32AQ9Y421 112 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 A0A1W2PQ67 120 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 RCCD1A6NED2 376 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 C1QTNF3-AMACRE9PGA6 284 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 CXCL14O95715 111 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 ATP4AP20648 1035 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 CYP2A7P20853 494 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 PTPN7P35236 360 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 CCDC153Q494R4 210 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 TFAP2DQ7Z6R9 452 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 PALB2Q86YC2 1186 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 MAGEB18Q96M61 343 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 RNF157Q96PX1 679 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 PHACTR1Q9C0D0 580 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 NMRAL1Q9HBL8 299 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 GPAMQ9HCL2 828 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 CHCHD3Q9NX63 227 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 NQO1P15559 274 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 IRF5Q13568 498 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 ECM1Q16610 540 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 RARS2Q5T160 578 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 LRRC8EQ6NSJ5 796 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 ACBD6Q9BR61 282 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 FZD8Q9H461 694 aa17.16■□□□□ 0.34
PCDHA13-202ENST00000409494 TNFRSF8P28908 595 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 CDK7P50613 346 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 PDCD2Q16342 344 aaPredicted RBP17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 RNF168Q8IYW5 571 aaPredicted RBP17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 KAT5Q92993 513 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 CELF6Q96J87 481 aaKnown RBP17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 KPNA5O15131 536 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 PRKCQQ04759 706 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 CRHR2Q13324 411 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 CHI3L2Q15782 390 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 ZNF333Q96JL9 665 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 O00370 1275 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 SUPT7LO94864 414 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 RAP1GDS1P52306 607 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 DRG2P55039 364 aaKnown RBP17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 ICA1LQ8NDH6 482 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 MAGEC3Q8TD91 643 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 AHSPQ9NZD4 102 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 CTNNAL1Q9UBT7 734 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 PHTF1Q9UMS5 762 aa17.15■□□□□ 0.34
PCDHA13-202ENST00000409494 RUVBL2Q9Y230 463 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms