RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 DOCK4Q8N1I0 1966 aa14.47□□□□□ -0.09
GPNMB-203ENST00000409458 C5orf60A6NFR6 353 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 NDC80O14777 642 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 C8AP07357 584 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 CA3P07451 260 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 IRS1P35568 1242 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 ACTN2P35609 894 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 MAGEA10P43363 369 aaPredicted RBP14.46□□□□□ -0.09
GPNMB-203ENST00000409458 KPNA1P52294 538 aaPredicted RBP14.46□□□□□ -0.09
GPNMB-203ENST00000409458 PPIDQ08752 370 aaKnown RBP14.46□□□□□ -0.09
GPNMB-203ENST00000409458 AUHQ13825 339 aaKnown RBP14.46□□□□□ -0.09
GPNMB-203ENST00000409458 SHHQ15465 462 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 SPDYCQ5MJ68 293 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 FAXCQ5TGI0 409 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 NADSYN1Q6IA69 706 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 HOOK3Q86VS8 718 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 KRT222Q8N1A0 295 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 MRPL43Q8N983 215 aaKnown RBP14.46□□□□□ -0.09
GPNMB-203ENST00000409458 KREMEN2Q8NCW0 462 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 CCNYQ8ND76 341 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 OR2W6PQ8NHA6 318 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 P2RY11Q96G91 374 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 PRMT1Q99873 361 aaKnown RBP14.46□□□□□ -0.09
GPNMB-203ENST00000409458 CDC42EP4Q9H3Q1 356 aaKnown RBP14.46□□□□□ -0.09
GPNMB-203ENST00000409458 SEMA4AQ9H3S1 761 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 NDFIP2Q9NV92 336 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 MPP6Q9NZW5 540 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 SLC12A6Q9UHW9 1150 aa14.46□□□□□ -0.09
GPNMB-203ENST00000409458 NYNRINQ9P2P1 1898 aaKnown RBP14.46□□□□□ -0.09
GPNMB-203ENST00000409458 A0A0A0MRY4 1105 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 H0YGN5 161 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 GOLGA8MH3BSY2 632 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 RNF103O00237 685 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 GRM6O15303 877 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 GCATO75600 419 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 SYF2O95926 243 aaKnown RBP14.46□□□□□ -0.1
GPNMB-203ENST00000409458 GLUD1P00367 558 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 LRG1P02750 347 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 F11P03951 625 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 GARSP41250 739 aaKnown RBP14.46□□□□□ -0.1
GPNMB-203ENST00000409458 PPP3CCP48454 512 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 UBE3AQ05086 875 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 CAMK1Q14012 370 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 KCNJ11Q14654 390 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 NUGGCQ68CJ6 796 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 FBXL22Q6P050 247 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 CCDC149Q6ZUS6 474 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 NLRP14Q86W24 1093 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 TMC8Q8IU68 726 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 ARHGAP12Q8IWW6 846 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 RTL3Q8N8U3 475 aaKnown RBP14.46□□□□□ -0.1
GPNMB-203ENST00000409458 HDAC11Q96DB2 347 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 SPATA13Q96N96 652 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 RUFY1Q96T51 708 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 CEP41Q9BYV8 373 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 FOXP3Q9BZS1 431 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 RNF38Q9H0F5 515 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 PABPC3Q9H361 631 aaKnown RBP14.46□□□□□ -0.1
GPNMB-203ENST00000409458 RAB6BQ9NRW1 208 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 SEPT10Q9P0V9 454 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 NFS1Q9Y697 457 aa14.46□□□□□ -0.1
GPNMB-203ENST00000409458 MTCL1Q9Y4B5 1905 aaKnown RBP14.45□□□□□ -0.1
GPNMB-203ENST00000409458 SHROOM3Q8TF72 1996 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 CHD7Q9P2D1 2997 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 DENND4CQ5VZ89 1909 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 IGLV3-10A0A075B6K4 115 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 GOLGA6L7A0A1B0GV03 622 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 WASH4PA8MWX3 477 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 NCAM2O15394 837 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 RIPK2O43353 540 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 METTL18O95568 372 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 MX2P20592 715 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 OAS2P29728 719 aaKnown RBP14.45□□□□□ -0.1
GPNMB-203ENST00000409458 CLCN4P51793 760 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 WASHC5Q12768 1159 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 GPS2Q13227 327 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 ALFQ53S48 1182 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 ANKRD20A2Q5SQ80 823 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 SYCP2LQ5T4T6 812 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 ANKRD20A1Q5TYW2 823 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 ANKRD20A3Q5VUR7 823 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 CHSY1Q86X52 802 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 HS6ST3Q8IZP7 471 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 IGSF8Q969P0 613 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 MYEOVQ96EZ4 313 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 RBM15Q96T37 977 aaKnown RBP eCLIP14.45□□□□□ -0.1
GPNMB-203ENST00000409458 LRRC3Q9BY71 257 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 TSPYL1Q9H0U9 437 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 ETNK1Q9HBU6 452 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 TRPC7Q9HCX4 862 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 PPARGC1AQ9UBK2 798 aaKnown RBP14.45□□□□□ -0.1
GPNMB-203ENST00000409458 ASB3Q9Y575 518 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 NUP205Q92621 2012 aa14.45□□□□□ -0.1
GPNMB-203ENST00000409458 ATG2AQ2TAZ0 1938 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 KCNK1O00180 336 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 DFFAO00273 331 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 NRG2O14511 850 aaPredicted RBP14.44□□□□□ -0.1
GPNMB-203ENST00000409458 CHADO15335 359 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 CNTN5O94779 1100 aa14.44□□□□□ -0.1
GPNMB-203ENST00000409458 IRF1P10914 325 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms