RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ARSEP51690 589 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 TMPRSS15P98073 1019 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 TFDP1Q14186 410 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 CCDC14Q49A88 953 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 ASPRV1Q53RT3 343 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 DCAF6Q58WW2 860 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 FSCBQ5H9T9 825 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 GJC2Q5T442 439 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 EGFLAMQ63HQ2 1017 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 PLA2G4FQ68DD2 849 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 C16orf89Q6UX73 402 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 LYSMD3Q7Z3D4 306 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 MMAAQ8IVH4 418 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 CPSF7Q8N684 471 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 NAT8LQ8N9F0 302 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 TMEM102Q8N9M5 508 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 CHST13Q8NET6 341 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 PIWIL2Q8TC59 973 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 RMND5BQ96G75 393 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 RILPQ96NA2 401 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 FERMT1Q9BQL6 677 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 OSBPL10Q9BXB5 764 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 TUT1Q9H6E5 874 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 C11orf49Q9H6J7 331 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 ACAD9Q9H845 621 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 OLAHQ9NV23 265 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 KCND2Q9NZV8 630 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 IPO11Q9UI26 975 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 IKBKGQ9Y6K9 419 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 NFIBO00712 420 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 TRDMT1O14717 391 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 MARCH6O60337 910 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 GCNT3O95395 438 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 ICAM1P05362 532 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 JAK1P23458 1154 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 CRHR1P34998 444 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 ALDH18A1P54886 795 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 MFAP3P55082 362 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 CDKL1Q00532 357 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SPIRE1Q08AE8 756 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 GPS1Q13098 491 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 PTK7Q13308 1070 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 ALCAMQ13740 583 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 RFTN1Q14699 578 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 KCNJ8Q15842 424 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 DGKDQ16760 1214 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 LRRC26Q2I0M4 334 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 RALGPS1Q5JS13 557 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 FAXCQ5TGI0 409 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 ITPRIPL1Q6GPH6 555 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 C16orf87Q6PH81 154 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 TIFABQ6ZNK6 161 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SETD3Q86TU7 594 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 TTC30AQ86WT1 665 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 NUDCD3Q8IVD9 361 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 DEFB107AQ8IZN7 70 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 PACRGLQ8N7B6 248 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 DDX1Q92499 740 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SERAC1Q96JX3 654 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 PIGSQ96S52 555 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UHRF1Q96T88 793 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 RMDN3Q96TC7 470 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 TRIM56Q9BRZ2 755 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 HTATIP2Q9BUP3 242 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 STRA6Q9BX79 667 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 RPF2Q9H7B2 306 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 C8orf4Q9NR00 106 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 AGPAT3Q9NRZ7 376 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 ANAPC7Q9UJX3 599 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 DOLKQ9UPQ8 538 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 COLQQ9Y215 455 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 COL6A3P12111 3177 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 KRBA1A5PL33 1030 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SOWAHBA6NEL2 793 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 C2orf71A6NGG8 1288 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 CFAP99D6REC4 459 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 GPR37O15354 613 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UGT1A9O60656 530 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 KRT37O76014 449 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SNRPAP09012 282 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 MAPTP10636 758 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 C7P10643 843 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UGT1A6P19224 532 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UGT1A1P22309 533 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UGT1A4P22310 534 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UGT1A3P35503 534 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 UGT1A5P35504 534 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 BMXP51813 675 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 EPHB1P54762 984 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 TMBIM6P55061 237 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 E2F2Q14209 437 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 SCARA3Q6AZY7 606 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 PPP4R4Q6NUP7 873 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 MAMDC4Q6UXC1 1216 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 PRR23CQ6ZRP0 262 aa10.89□□□□□ -0.67
NIF3L1-204ENST00000409357 ENOSF1Q7L5Y1 443 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms