RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 TMA16Q96EY4 203 aaKnown RBP14.55□□□□□ -0.08
CHRNA1-204ENST00000409323 HERPUD2Q9BSE4 406 aa14.55□□□□□ -0.08
CHRNA1-204ENST00000409323 HEMGNQ9BXL5 484 aa14.55□□□□□ -0.08
CHRNA1-204ENST00000409323 OSBPL2Q9H1P3 480 aa14.55□□□□□ -0.08
CHRNA1-204ENST00000409323 NDFIP2Q9NV92 336 aa14.55□□□□□ -0.08
CHRNA1-204ENST00000409323 ETNK2Q9NVF9 386 aa14.55□□□□□ -0.08
CHRNA1-204ENST00000409323 STOML2Q9UJZ1 356 aa14.55□□□□□ -0.08
CHRNA1-204ENST00000409323 NUP205Q92621 2012 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 CCDC66A2RUB6 948 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 KCNK3O14649 394 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 SLC9A3R1O14745 358 aaPredicted RBP14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 DAPK3O43293 454 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 MAP3K6O95382 1288 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 LATS1O95835 1130 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 TUBB4AP04350 444 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 IL4RP24394 825 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 AIF1P55008 147 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 RWDD2BP57060 319 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 DYNLT1P63172 113 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 MANEALQ5VSG8 457 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 LRRC38Q5VT99 294 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 LRRC31Q6UY01 552 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 RFX8Q6ZV50 586 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 NYAP1Q6ZVC0 841 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 CPXM2Q8N436 756 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 UBL4BQ8N7F7 174 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 ZNF592Q92610 1267 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 TBC1D31Q96DN5 1066 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 C1orf74Q96LT6 269 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 CSPG4P5Q96PW8 444 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 EPAS1Q99814 870 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 ECT2Q9H8V3 914 aa14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.54□□□□□ -0.08
CHRNA1-204ENST00000409323 ARNTLO00327 626 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 GFRA2O00451 464 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 CHADO15335 359 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 ZRANB2O95218 330 aaKnown RBP eCLIP14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 ADH5P11766 374 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 TYRP14679 529 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 HOXD9P28356 352 aaPredicted RBP14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 ARL4AP40617 200 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 SLC6A11P48066 632 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 ADCY2Q08462 1091 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 MESP2Q0VG99 397 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 RUNX3Q13761 415 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 FYB2Q5VWT5 728 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 SPOCD1Q6ZMY3 1216 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 ADAT2Q7Z6V5 191 aaKnown RBP14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 RFX6Q8HWS3 928 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 TP53INP2Q8IXH6 220 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 KATNAL2Q8IYT4 538 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 OR52K2Q8NGK3 314 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 LRRN4Q8WUT4 740 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 ATP2A3Q93084 1043 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 DDX50Q9BQ39 737 aaKnown RBP14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 HEBP1Q9NRV9 189 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 DDX56Q9NY93 547 aaKnown RBP14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 SMARCAL1Q9NZC9 954 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 IGSF9Q9P2J2 1179 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 JRKLQ9Y4A0 524 aa14.53□□□□□ -0.08
CHRNA1-204ENST00000409323 MIF4GDA9UHW6 222 aaKnown RBP14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 H3BRJ5 948 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 ZNF185O15231 689 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 NFATC1O95644 943 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 CYBBP04839 570 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 ERCC2P18074 760 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 PDGFRLQ15198 375 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 GAB4Q2WGN9 574 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 MPPE1Q53F39 396 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 ANKRD20A8PQ5CZ79 823 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 FSCBQ5H9T9 825 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 RABGAP1LQ5R372 815 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 FAM182AQ5T1J6 154 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 RNF135Q8IUD6 432 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 PSTKQ8IV42 348 aaKnown RBP14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 HJURPQ8NCD3 748 aaPredicted RBP14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 PCDH19Q8TAB3 1148 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 TSC1Q92574 1164 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 HAUS1Q96CS2 278 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 CHFRQ96EP1 664 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 CELF6Q96J87 481 aaKnown RBP14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 ZYG11BQ9C0D3 744 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 ARHGEF4Q9NR80 690 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 PRKAG3Q9UGI9 489 aa14.52□□□□□ -0.08
CHRNA1-204ENST00000409323 VCANP13611 3396 aa14.52□□□□□ -0.09
CHRNA1-204ENST00000409323 IGLV3-10A0A075B6K4 115 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 H0Y626 953 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 ADH1CP00326 375 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 CDKN2BP42772 138 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 ETF1P62495 437 aaKnown RBP14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 KDSRQ06136 332 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 TDGQ13569 410 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 DPYSQ14117 519 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 PDK2Q15119 407 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 ASTLQ6HA08 431 aaPredicted RBP14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 NPNTQ6UXI9 565 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 B4GALNT4Q76KP1 1039 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 MFN1Q8IWA4 741 aa14.51□□□□□ -0.09
CHRNA1-204ENST00000409323 SFTPA1Q8IWL2 248 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms