RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 OR14C36Q8NHC7 312 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 UBXN6Q9BZV1 441 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 MAGEF1Q9HAY2 307 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 STIM2Q9P246 746 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 FZD4Q9ULV1 537 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 HECTD1Q9ULT8 2610 aa17.34■□□□□ 0.37
CHMP3-203ENST00000409225 GOLGA6L7A0A1B0GV03 622 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 PVALEFA0A1B0GWK0 134 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 B8ZZF3 427 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 POLR2DO15514 142 aaKnown RBP17.33■□□□□ 0.36
CHMP3-203ENST00000409225 LATS1O95835 1130 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 MPOP05164 745 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 TRIM49P0CI25 452 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 TRIM49CP0CI26 452 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 ACP1P24666 158 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 SLC8A1P32418 973 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 CSKP41240 450 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 UCNP55089 124 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 PPP2CBP62714 309 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 PPP2CAP67775 309 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 KCNC4Q03721 635 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 PROX2Q3B8N5 592 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 PKDCCQ504Y2 493 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 PM20D1Q6GTS8 502 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 SHC4Q6S5L8 630 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 BHLHA9Q7RTU4 235 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 MFN1Q8IWA4 741 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 GRAMD1CQ8IYS0 662 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 ZNF578Q96N58 590 aaPredicted RBP17.33■□□□□ 0.36
CHMP3-203ENST00000409225 MMRN2Q9H8L6 949 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 ERVMER34-1Q9H9K5 563 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 FRMD4BQ9Y2L6 1034 aa17.33■□□□□ 0.36
CHMP3-203ENST00000409225 ARID1BQ8NFD5 2236 aaPredicted RBP17.32■□□□□ 0.36
CHMP3-203ENST00000409225 TTC34A8MYJ7 566 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 TULP2O00295 520 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 SIGLEC6O43699 453 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 VAMP7P51809 220 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 ADPRHP54922 357 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 SLC8A3P57103 927 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 DAB2P98082 770 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 E2F1Q01094 437 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 STK4Q13043 487 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 CUL4AQ13619 759 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 C9orf64Q5T6V5 341 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 PIK3R6Q5UE93 754 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 NAPEPLDQ6IQ20 393 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 SND1Q7KZF4 910 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHMP3-203ENST00000409225 AADATQ8N5Z0 425 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 ANKRD52Q8NB46 1076 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 SLC4A11Q8NBS3 891 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 KIAA0895Q8NCT3 520 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 CCDC150Q8NCX0 1101 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 TTC17Q96AE7 1141 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 HIC2Q96JB3 615 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 LMLNQ96KR4 655 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 MRGPRX3Q96LB0 322 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 KCTD10Q9H3F6 313 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 MTMR6Q9Y217 621 aa17.32■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3DA0A087WVF3 549 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3IA0A087WXS9 549 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3EA0A087X179 549 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3KA0A087X1G2 549 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3FA6NER0 549 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-203ENST00000409225 C10orf142B7Z368 130 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3LB9A6J9 549 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TRIM38O00635 465 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 CUTAO60888 179 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 PPP6R2O75170 966 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 ASLP04424 464 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3HP0C7X1 549 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 C6P13671 934 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 GOT1P17174 413 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 SLC6A4P31645 630 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 CTSOP43234 321 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-203ENST00000409225 GABREP78334 506 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 PPP3CAQ08209 521 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 GOLGA7BQ2TAP0 167 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 BSPRYQ5W0U4 402 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 ARHGAP17Q68EM7 881 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3GQ6DHY5 549 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3CQ6IPX1 549 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TBC1D3Q8IZP1 549 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-203ENST00000409225 MFSD2AQ8NA29 543 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 TMEM174Q8WUU8 243 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 KCNE4Q8WWG9 221 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 IPO9Q96P70 1041 aaKnown RBP17.31■□□□□ 0.36
CHMP3-203ENST00000409225 LRRC4Q9HBW1 653 aa17.31■□□□□ 0.36
CHMP3-203ENST00000409225 INTS6Q9UL03 887 aaKnown RBP17.31■□□□□ 0.36
CHMP3-203ENST00000409225 EDDM13A0A1B0GTR0 161 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 YJEFN3A6XGL0 299 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 E7ENQ6 273 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 PDXKO00764 312 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 KLK10O43240 276 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 SLC28A2O43868 658 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 KRT10P13645 584 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 MAT2AP31153 395 aaKnown RBP17.3■□□□□ 0.36
CHMP3-203ENST00000409225 RAD23BP54727 409 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 ADIGQ0VDE8 80 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 KMT5BQ4FZB7 885 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms