RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 RAPGEF4Q8WZA2 1011 aa4.52□□□□□ -1.69
GTDC1-206ENST00000409214 CORO2AQ92828 525 aa4.52□□□□□ -1.69
GTDC1-206ENST00000409214 GON7Q9BXV9 100 aa4.52□□□□□ -1.69
GTDC1-206ENST00000409214 GLIS2Q9BZE0 524 aaPredicted RBP4.52□□□□□ -1.69
GTDC1-206ENST00000409214 SMG9Q9H0W8 520 aaKnown RBP4.52□□□□□ -1.69
GTDC1-206ENST00000409214 STN1Q9H668 368 aaKnown RBP4.52□□□□□ -1.69
GTDC1-206ENST00000409214 SMPD3Q9NY59 655 aaPredicted RBP4.52□□□□□ -1.69
GTDC1-206ENST00000409214 TAS2R10Q9NYW0 307 aa4.52□□□□□ -1.69
GTDC1-206ENST00000409214 SUCLA2Q9P2R7 463 aaPredicted RBP4.52□□□□□ -1.69
GTDC1-206ENST00000409214 SPASTQ9UBP0 616 aa4.52□□□□□ -1.69
GTDC1-206ENST00000409214 IL19Q9UHD0 177 aa4.52□□□□□ -1.69
GTDC1-206ENST00000409214 LYVE1Q9Y5Y7 322 aa4.52□□□□□ -1.69
GTDC1-206ENST00000409214 TAF6LQ9Y6J9 622 aa4.52□□□□□ -1.69
GTDC1-206ENST00000409214 SHROOM2Q13796 1616 aa4.52□□□□□ -1.69
GTDC1-206ENST00000409214 WDR33Q9C0J8 1336 aaKnown RBP4.52□□□□□ -1.69
GTDC1-206ENST00000409214 ATP10DQ9P241 1426 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 KIDINS220Q9ULH0 1771 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 A0A0A6YYC8 382 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 FAM90A27PA6NNH2 459 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 SOBPA7XYQ1 873 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 I3L1I5 382 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 RAB27BO00194 218 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 DDAH2O95865 285 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 YY1P25490 414 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 THBS2P35442 1172 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 EPHB3P54753 998 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 GUCY1B3Q02153 619 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 ARHGEF6Q15052 776 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 RPS6KA2Q15349 733 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 LETM2Q2VYF4 491 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 CCDC40Q4G0X9 1142 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 UTP14CQ5TAP6 766 aaKnown RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 C12orf60Q5U649 245 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 SCARA3Q6AZY7 606 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 CTR9Q6PD62 1173 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 Q6ZVL8 140 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 MIB1Q86YT6 1006 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 DHX40Q8IX18 779 aaKnown RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 AOPEPQ8N6M6 819 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 DLG3Q92796 817 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 FOXRED1Q96CU9 486 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 KCTD12Q96CX2 325 aaKnown RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 WRNIP1Q96S55 665 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 GAD1Q99259 594 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 PDCL3Q9H2J4 239 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 LDAHQ9H6V9 325 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 CLDND1Q9NY35 253 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 MORF4L1Q9UBU8 362 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 FBXO40Q9UH90 709 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 MAP3K2Q9Y2U5 619 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 CAB39Q9Y376 341 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 VWDEQ8N2E2 1590 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 ZFYVE9O95405 1425 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 GOLGA6L7A0A1B0GV03 622 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 LRRD1A4D1F6 860 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 LIPT2A6NK58 231 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 PSMA7O14818 248 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 POLR3GO15318 223 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 RNF113AO15541 343 aaKnown RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 GPRIN2O60269 458 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 BUB1BO60566 1050 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 ALDH1A2O94788 518 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 PNPP00491 289 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 PFKMP08237 780 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 GNAT1P11488 350 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 PDGFRAP16234 1089 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 CHRM3P20309 590 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 MALP21145 153 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 PTGER3P43115 390 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 RAC3P60763 192 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 PRKCEQ02156 737 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 NFIAQ12857 509 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 LMAN2Q12907 356 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 UBAP2LQ14157 1087 aaKnown RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 TTLL4Q14679 1199 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 EFTUD2Q15029 972 aaKnown RBP eCLIP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 RAB41Q5JT25 222 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 KIAA0930Q6ICG6 404 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 ZNF530Q6P9A1 599 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 CHST3Q7LGC8 479 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 TRIM74Q86UV6 250 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 TRIM73Q86UV7 250 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 FAM35AQ86V20 835 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 LUZP1Q86V48 1076 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 TMEM200AQ86VY9 491 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 MRPL43Q8N983 215 aaKnown RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 SUPT20HQ8NEM7 779 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 OR52M1Q8NGK5 317 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 PIP4K2CQ8TBX8 421 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 HASPINQ8TF76 798 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 DUSP19Q8WTR2 217 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 SYTL4Q96C24 671 aaPredicted RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 TEX12Q9BXU0 123 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 MRPL46Q9H2W6 279 aaKnown RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 SMARCAD1Q9H4L7 1026 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 DNAJB12Q9NXW2 375 aaKnown RBP4.51□□□□□ -1.69
GTDC1-206ENST00000409214 SLCO3A1Q9UIG8 710 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 SARDHQ9UL12 918 aa4.51□□□□□ -1.69
GTDC1-206ENST00000409214 GRID1Q9ULK0 1009 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms