RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 NFKBIEO00221 500 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 BUD23O43709 281 aaKnown RBP17.28■□□□□ 0.36
SYNC-202ENST00000409190 ITGAXP20702 1163 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 CMPK2Q5EBM0 449 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 NCBP2-AS2Q69YL0 99 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 IYDQ6PHW0 289 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 ST13P4Q8IZP2 240 aaPredicted RBP17.28■□□□□ 0.36
SYNC-202ENST00000409190 PPP2R3CQ969Q6 453 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 MFSD3Q96ES6 412 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 DNAJC1Q96KC8 554 aaKnown RBP17.28■□□□□ 0.36
SYNC-202ENST00000409190 SNX15Q9NRS6 342 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 COPG2Q9UBF2 871 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 INPP5FQ9Y2H2 1132 aa17.28■□□□□ 0.36
SYNC-202ENST00000409190 NELFEP18615 380 aaKnown RBP17.27■□□□□ 0.36
SYNC-202ENST00000409190 ACAT1P24752 427 aaKnown RBP17.27■□□□□ 0.36
SYNC-202ENST00000409190 MSLNQ13421 630 aaPredicted RBP17.27■□□□□ 0.36
SYNC-202ENST00000409190 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.27■□□□□ 0.36
SYNC-202ENST00000409190 LBX2Q6XYB7 198 aa17.27■□□□□ 0.36
SYNC-202ENST00000409190 MFN1Q8IWA4 741 aa17.27■□□□□ 0.36
SYNC-202ENST00000409190 NUF2Q9BZD4 464 aa17.27■□□□□ 0.36
SYNC-202ENST00000409190 KLHL4Q9C0H6 718 aa17.27■□□□□ 0.36
SYNC-202ENST00000409190 PRDM12Q9H4Q4 367 aa17.27■□□□□ 0.36
SYNC-202ENST00000409190 OCEL1Q9H607 264 aa17.27■□□□□ 0.36
SYNC-202ENST00000409190 ELP3Q9H9T3 547 aa17.27■□□□□ 0.36
SYNC-202ENST00000409190 TXNRD2Q9NNW7 524 aa17.27■□□□□ 0.36
SYNC-202ENST00000409190 CACNG4Q9UBN1 327 aa17.27■□□□□ 0.36
SYNC-202ENST00000409190 PHGDHO43175 533 aaKnown RBP17.27■□□□□ 0.35
SYNC-202ENST00000409190 MPSTP25325 297 aa17.27■□□□□ 0.35
SYNC-202ENST00000409190 GRIA2P42262 883 aa17.27■□□□□ 0.35
SYNC-202ENST00000409190 SULT1E1P49888 294 aa17.27■□□□□ 0.35
SYNC-202ENST00000409190 ABCE1P61221 599 aaKnown RBP17.27■□□□□ 0.35
SYNC-202ENST00000409190 GK3PQ14409 553 aa17.27■□□□□ 0.35
SYNC-202ENST00000409190 LIN52Q52LA3 116 aa17.27■□□□□ 0.35
SYNC-202ENST00000409190 DALRD3Q5D0E6 543 aaKnown RBP17.27■□□□□ 0.35
SYNC-202ENST00000409190 SCYL1Q96KG9 808 aa17.27■□□□□ 0.35
SYNC-202ENST00000409190 ZMAT2Q96NC0 199 aaKnown RBP17.27■□□□□ 0.35
SYNC-202ENST00000409190 FCRL3Q96P31 734 aaPredicted RBP17.27■□□□□ 0.35
SYNC-202ENST00000409190 PRMT7Q9NVM4 692 aaPredicted RBP17.27■□□□□ 0.35
SYNC-202ENST00000409190 MOCS1Q9NZB8 636 aa17.27■□□□□ 0.35
SYNC-202ENST00000409190 CLDN5O00501 218 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 KLHL2O95198 593 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 VCLP18206 1134 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 AOC1P19801 751 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 IFRD2Q12894 506 aaPredicted RBP17.26■□□□□ 0.35
SYNC-202ENST00000409190 KYAT3Q6YP21 454 aaKnown RBP17.26■□□□□ 0.35
SYNC-202ENST00000409190 SNX32Q86XE0 403 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 USP33Q8TEY7 942 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 CNBD2Q96M20 576 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 ZNF670Q9BS34 389 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 MTMR10Q9NXD2 777 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 SLC39A10Q9ULF5 831 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 HMGB2P26583 209 aaKnown RBP17.26■□□□□ 0.35
SYNC-202ENST00000409190 RXRBP28702 533 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 DEFB106AQ8N104 65 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 PNPLA1Q8N8W4 532 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 CXorf38Q8TB03 319 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 SLC2A14Q8TDB8 520 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 SSX2IPQ9Y2D8 614 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 BIRC5O15392 142 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 COX4I1P13073 169 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 ARSAP15289 507 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 CRABP2P29373 138 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 NDUFV1P49821 464 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 ZNF280AP59817 542 aaPredicted RBP17.26■□□□□ 0.35
SYNC-202ENST00000409190 PDCD2Q16342 344 aaPredicted RBP17.26■□□□□ 0.35
SYNC-202ENST00000409190 CERCAMQ5T4B2 595 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 ARCQ7LC44 396 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 CATSPER2Q96P56 530 aa17.26■□□□□ 0.35
SYNC-202ENST00000409190 A0A0A0MRY4 1105 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 TK2O00142 265 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 IRF6O14896 467 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 FKBP6O75344 327 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 GCATO75600 419 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 TTLL12Q14166 644 aaPredicted RBP17.25■□□□□ 0.35
SYNC-202ENST00000409190 FBXL19Q6PCT2 694 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 MCUQ8NE86 351 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 ZSCAN18Q8TBC5 510 aaPredicted RBP17.25■□□□□ 0.35
SYNC-202ENST00000409190 ARNTL2Q8WYA1 636 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 SPATA13Q96N96 652 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 CYP3A43Q9HB55 503 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 A0A096LPK6 155 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 ZNF460Q14592 562 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 PDK3Q15120 406 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 PDSS2Q86YH6 399 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 CCNYL1Q8N7R7 359 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 LRRC39Q96DD0 335 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 TMA16Q96EY4 203 aaKnown RBP17.25■□□□□ 0.35
SYNC-202ENST00000409190 CDRT15Q96T59 188 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 CENPKQ9BS16 269 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 SPATA16Q9BXB7 569 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 COPS7BQ9H9Q2 264 aaPredicted RBP17.25■□□□□ 0.35
SYNC-202ENST00000409190 SNX10Q9Y5X0 201 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 MT-CO1P00395 513 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 KCTD2Q14681 263 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 TDRD5Q8NAT2 981 aaKnown RBP17.25■□□□□ 0.35
SYNC-202ENST00000409190 ICA1LQ8NDH6 482 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 CMTM5Q96DZ9 223 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 SMARCAD1Q9H4L7 1026 aa17.25■□□□□ 0.35
SYNC-202ENST00000409190 DDX18Q9NVP1 670 aaKnown RBP17.25■□□□□ 0.35
SYNC-202ENST00000409190 FER1L6Q2WGJ9 1857 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms