RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ATP5BP06576 529 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 POLR2EP19388 210 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 RFC1P35251 1148 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 IL12RB1P42701 662 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 LMAN2Q12907 356 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 ZNF234Q14588 700 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 CCDC14Q49A88 953 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 FSCBQ5H9T9 825 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 TTC39BQ5VTQ0 682 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 MBLAC2Q68D91 279 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 KIAA1211LQ6NV74 962 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 PPP1R2P3Q6NXS1 205 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 MCOLN2Q8IZK6 566 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 C3orf20Q8ND61 904 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 TAS2R14Q9NYV8 317 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 KIAA1522Q9P206 1035 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 VANGL2Q9ULK5 521 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 CAPN11Q9UMQ6 739 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 INVSQ9Y283 1065 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 SIGLEC16A6NMB1 481 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 ENDOD1O94919 500 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 GGCXP38435 758 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 ZBED6P86452 979 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 STARD3Q14849 445 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 CDO1Q16878 200 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 C15orf59Q2T9L4 293 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 LAIR1Q6GTX8 287 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 DNAJC24Q6P3W2 148 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 WDR59Q6PJI9 974 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 BNIPLQ7Z465 357 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 CIR1Q86X95 450 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 FAM131BQ86XD5 332 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 CCAR2Q8N163 923 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 OLIG1Q8TAK6 271 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 CYB5D2Q8WUJ1 264 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 IGSF8Q969P0 613 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 VCPIP1Q96JH7 1222 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 LMLNQ96KR4 655 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 ANLNQ9NQW6 1124 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 GMEB2Q9UKD1 530 aa18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 LUC7L2Q9Y383 392 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.52■□□□□ 0.56
PDLIM2-206ENST00000409141 A0A1B0GVM2 712 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 ANKRD62A6NC57 917 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 TCAF2A6NFQ2 919 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 DCLK1O15075 740 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 SYNCRIPO60506 623 aaKnown RBP18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 MOCS3O95396 460 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 DLDP09622 509 aaKnown RBP18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 GABRG2P18507 467 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 PTPN9P43378 593 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 ENPP2Q13822 863 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 OTOGLQ3ZCN5 2332 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 FUT11Q495W5 492 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 FNDC3BQ53EP0 1204 aaKnown RBP18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 SERPINA13PQ6UXR4 307 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 WDR87Q6ZQQ6 2873 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 C14orf80Q86SX3 495 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 KBTBD6Q86V97 674 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 DCLK2Q8N568 766 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 SYN2Q92777 582 aaPredicted RBP18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 TMPRSS4Q9NRS4 437 aa18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 BZW2Q9Y6E2 419 aaKnown RBP18.52■□□□□ 0.55
PDLIM2-206ENST00000409141 I6L893 689 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 DDX3XO00571 662 aaKnown RBP eCLIP18.51■□□□□ 0.559e-11■■■■■ 33.8
PDLIM2-206ENST00000409141 EPHX1P07099 455 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 GZMAP12544 262 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 GPD1P21695 349 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 RRM1P23921 792 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 CSKP41240 450 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 RAB6CQ53S08 254 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 TDRD12Q587J7 1177 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 ACBD5Q5T8D3 534 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 SH3PXD2AQ5TCZ1 1133 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 LRRC31Q6UY01 552 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 FAM160A2Q8N612 972 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 RLN3Q8WXF3 142 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 TTC17Q96AE7 1141 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 C1orf74Q96LT6 269 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 RAB6CQ9H0N0 254 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 CD248Q9HCU0 757 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 INTS6Q9UL03 887 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 SNX10Q9Y5X0 201 aa18.51■□□□□ 0.55
PDLIM2-206ENST00000409141 ITIH6Q6UXX5 1313 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 TCRBV5S1A1TA0A578 114 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 FTLP02792 175 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 GYPCP04921 128 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 CASP14P31944 242 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 ZNF177Q13360 481 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 BYSLQ13895 437 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 PTPRNQ16849 979 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 ARL13BQ3SXY8 428 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 C5orf22Q49AR2 442 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 PITRM1Q5JRX3 1037 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 DCUN1D2Q6PH85 259 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 STRADAQ7RTN6 431 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 FAM172AQ8WUF8 416 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 CENPIQ92674 756 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms