RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 RGPD4Q7Z3J3 1758 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 SLC12A8A0AV02 714 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 ZWINTO95229 277 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 MYL2P10916 166 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 ESRRAP11474 423 aaPredicted RBP12.85□□□□□ -0.35
ATG9A-203ENST00000409033 MX2P20592 715 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 PTPN9P43378 593 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 SLC5A3P53794 718 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 TUSC3Q13454 348 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 TAF1BQ53T94 588 aaPredicted RBP12.85□□□□□ -0.35
ATG9A-203ENST00000409033 CYB5D1Q6P9G0 228 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 CRLF3Q8IUI8 442 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 MFSD3Q96ES6 412 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 MYLK2Q9H1R3 596 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 CYP4F11Q9HBI6 524 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 TMLHEQ9NVH6 421 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 CDH9Q9ULB4 789 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 TRIM17Q9Y577 477 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 ARID2Q68CP9 1835 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 TBKBP1A7MCY6 615 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 PHGDHO43175 533 aaKnown RBP12.85□□□□□ -0.35
ATG9A-203ENST00000409033 ABHD2P08910 425 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 KCNE1P15382 129 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 OTOAQ7RTW8 1153 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 FITM2Q8N6M3 262 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 USH1CQ9Y6N9 552 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 PAPPA2Q9BXP8 1791 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 FAM237BA0A1B0GVD1 139 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 A0A1W2PQH9 124 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 A8MUI8 341 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 DNAJC6O75061 913 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 INHBEP58166 350 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 ZBTB6Q15916 424 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 DPYSL2Q16555 572 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 STRADAQ7RTN6 431 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 PARP9Q8IXQ6 854 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 TEKT4Q8WW24 435 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATG9A-203ENST00000409033 E2F7Q96AV8 911 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 EBNA1BP2Q99848 306 aaKnown RBP12.85□□□□□ -0.35
ATG9A-203ENST00000409033 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
ATG9A-203ENST00000409033 PCDHB7Q9Y5E2 793 aa12.85□□□□□ -0.35
ATG9A-203ENST00000409033 FBXO21O94952 628 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 HOXD10P28358 340 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 SERPINB3P29508 390 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 PSMD5Q16401 504 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
ATG9A-203ENST00000409033 DBF4BQ8NFT6 615 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 OR10T2Q8NGX3 314 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 GIMAP7Q8NHV1 300 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 RFWD2Q8NHY2 731 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 CCDC124Q96CT7 223 aaKnown RBP12.84□□□□□ -0.35
ATG9A-203ENST00000409033 EXOC2Q96KP1 924 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 CAPNS2Q96L46 248 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 FCRL2Q96LA5 508 aaPredicted RBP12.84□□□□□ -0.35
ATG9A-203ENST00000409033 BEGAINQ9BUH8 593 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 TMEM109Q9BVC6 243 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 ZNF358Q9NW07 568 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 FZD10Q9ULW2 581 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 L3MBTL1Q9Y468 752 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 TPP1O14773 563 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 LYPLA1O75608 230 aaPredicted RBP12.84□□□□□ -0.35
ATG9A-203ENST00000409033 HSPA4LO95757 839 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 WARSP23381 471 aaKnown RBP12.84□□□□□ -0.35
ATG9A-203ENST00000409033 LPIN1Q14693 890 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 USP10Q14694 798 aaKnown RBP12.84□□□□□ -0.35
ATG9A-203ENST00000409033 ITPRIPL1Q6GPH6 555 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 ARHGAP36Q6ZRI8 547 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 CFAP52Q8N1V2 620 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 TMEM86AQ8N2M4 240 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 CENPTQ96BT3 561 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 GDAP2Q9NXN4 497 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 GIT1Q9Y2X7 761 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 LOC100653049A0A140TA62 436 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 PAGE1O75459 146 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 KRT34O76011 436 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 VAPBO95292 243 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 ACLYP53396 1101 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 DLG2Q15700 870 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 RAP1GAP2Q684P5 730 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 LRRTM3Q86VH5 581 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 ECHDC2Q86YB7 292 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 SREK1Q8WXA9 508 aaKnown RBP12.84□□□□□ -0.35
ATG9A-203ENST00000409033 APOPT1Q96IL0 206 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 PPP1R10Q96QC0 940 aaKnown RBP12.84□□□□□ -0.35
ATG9A-203ENST00000409033 SENP6Q9GZR1 1112 aaPredicted RBP12.84□□□□□ -0.35
ATG9A-203ENST00000409033 CNGB3Q9NQW8 809 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 CHRAC1Q9NRG0 131 aa12.84□□□□□ -0.35
ATG9A-203ENST00000409033 PTPRFP10586 1907 aa12.83□□□□□ -0.35
ATG9A-203ENST00000409033 KPNA6O60684 536 aa12.83□□□□□ -0.36
ATG9A-203ENST00000409033 DCTN3O75935 186 aa12.83□□□□□ -0.36
ATG9A-203ENST00000409033 CCR1P32246 355 aa12.83□□□□□ -0.36
ATG9A-203ENST00000409033 FDFT1P37268 417 aa12.83□□□□□ -0.36
ATG9A-203ENST00000409033 NR2C2P49116 596 aa12.83□□□□□ -0.36
ATG9A-203ENST00000409033 STX3Q13277 289 aa12.83□□□□□ -0.36
ATG9A-203ENST00000409033 KCNJ11Q14654 390 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms