RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 WDR37Q9Y2I8 494 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 TSPAN3O60637 253 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 GNA14O95837 355 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 PENKP01210 267 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 FYNP06241 537 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 KRT5P13647 590 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 GBP1P32455 592 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 DGKGP49619 791 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 MFAP3P55082 362 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 COG7P83436 770 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 PUM1Q14671 1186 aaKnown RBP eCLIP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 CNGA2Q16280 664 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 KBTBD12Q3ZCT8 623 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 PLA2G2CQ5R387 149 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 ARHGAP22Q7Z5H3 698 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 CCDC50Q8IVM0 306 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 ARHGAP18Q8N392 663 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 OR8K1Q8NGG5 319 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 FAM81BQ96LP2 452 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 CDK5RAP1Q96SZ6 601 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 MIS12Q9H081 205 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 MMADHCQ9H3L0 296 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 ACBD3Q9H3P7 528 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 UBE2TQ9NPD8 197 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 WDR35Q9P2L0 1181 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 TJP2Q9UDY2 1190 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 FBXO10Q9UK96 956 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 KIAA1257Q9ULG3 409 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 STARD13Q9Y3M8 1113 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 MYO18AQ92614 2054 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 GOLGA6L7A0A1B0GV03 622 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 FAM170AA1A519 330 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 BECN2A8MW95 431 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 PATE3B3GLJ2 98 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 LRP3O75074 770 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 HOXB2P14652 356 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 GABRG2P18507 467 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 FECHP22830 423 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 MPLP40238 635 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 PTGER3P43115 390 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 GPD2P43304 727 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 CREB5Q02930 508 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 CETN1Q12798 172 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 TRIP4Q15650 581 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 MAP7D1Q3KQU3 841 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 EOGTQ5NDL2 527 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 PMS2CLQ68D20 193 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 TMEM215Q68D42 235 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 TRIM65Q6PJ69 517 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 ERMP1Q7Z2K6 904 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 SCUBE3Q8IX30 993 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 CCDC170Q8IYT3 715 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 CHPFQ8IZ52 775 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 DEFB119Q8N690 84 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 GPR161Q8N6U8 529 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 ZFAND2BQ8WV99 257 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 SORCS1Q8WY21 1168 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 MYEOVQ96EZ4 313 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 PIWIL1Q96J94 861 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 XPO6Q96QU8 1125 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 TSGA10Q9BZW7 698 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 L2HGDHQ9H9P8 463 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 CNGB3Q9NQW8 809 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 CDV3Q9UKY7 258 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 CNTN6Q9UQ52 1028 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 DMXL2Q8TDJ6 3036 aa10.05□□□□□ -0.8
NIF3L1-202ENST00000409020 ACACBO00763 2458 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 GFRA2O00451 464 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 KRT38O76015 456 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 NDUFV2P19404 249 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 HOXD9P28356 352 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 NTSR1P30989 418 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 P2RY2P41231 377 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 SNX1Q13596 522 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 ARHGAP44Q17R89 818 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 USP39Q53GS9 565 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 APLFQ8IW19 511 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 FAM217AQ8IXS0 508 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 TMEFF1Q8IYR6 380 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 ADAM32Q8TC27 787 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 RNF139Q8WU17 664 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 SLC39A7Q92504 469 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 PLD4Q96BZ4 506 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 LOXL4Q96JB6 756 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 DHRS1Q96LJ7 313 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 SIX2Q9NPC8 291 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 STRIP2Q9ULQ0 834 aa10.04□□□□□ -0.8
NIF3L1-202ENST00000409020 BCLAF3A2AJT9 711 aaKnown RBP10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 PRR5-ARHGAP8B1AHC4 643 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 CBFA2T2O43439 604 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 ZNF806P0C7X5 589 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 PON1P27169 355 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 SLC6A4P31645 630 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 IL12RB1P42701 662 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 RANBP1P43487 201 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 PITX1P78337 314 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 ARHGAP8P85298 464 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 TAF5Q15542 800 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 TPD52L1Q16890 204 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms