RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TAAR1Q96RJ0 339 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 GORASP1Q9BQQ3 440 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 MID1IP1Q9NPA3 183 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 SCUBE2Q9NQ36 999 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 ASTN2O75129 1339 aaPredicted RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 DYNC1LI2O43237 492 aaPredicted RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 PAEPP09466 180 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 LHX1P48742 406 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 MZT2AQ6P582 158 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 CYP2R1Q6VVX0 501 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 OOSP2Q86WS3 158 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 SYTL1Q8IYJ3 562 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 C8orf4Q9NR00 106 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 ARHGAP28Q9P2N2 729 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 C3orf18Q9UK00 162 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 PRPF19Q9UMS4 504 aaKnown RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 UNC13BO14795 1591 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 DLC1Q96QB1 1528 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 SYNCRIPO60506 623 aaKnown RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 EIF4BP23588 611 aaKnown RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 LRPAP1P30533 357 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 CENPAP49450 140 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 TGM3Q08188 693 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 SH3RF1Q7Z6J0 888 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 DGCR14Q96DF8 476 aaKnown RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 RIBC2Q9H4K1 309 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 ITGA11Q9UKX5 1188 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 DNPEPQ9ULA0 475 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 WDR27A2RRH5 827 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 C2CD2LO14523 706 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 PRRG1O14668 218 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 ASS1P00966 412 aaKnown RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 EPB42P16452 691 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 PAICSP22234 425 aaKnown RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 RENBPP51606 427 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 SLC44A2Q8IWA5 706 aaPredicted RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 EMC1Q8N766 993 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 ACOX2Q99424 681 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 EHD4Q9H223 541 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 CCDC167Q9P0B6 97 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 SIK3Q9Y2K2 1263 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 BIRC5O15392 142 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 NTSR2O95665 410 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 ACAT1P24752 427 aaKnown RBP13.22□□□□□ -0.29
RNF43-201ENST00000407977 GRK3P35626 688 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 CCT3P49368 545 aaKnown RBP13.22□□□□□ -0.29
RNF43-201ENST00000407977 BNIP2Q12982 314 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 NR1D2Q14995 579 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 ZNF276Q8N554 614 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 PHF21BQ96EK2 531 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 TEKT5Q96M29 485 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 APOL2Q9BQE5 337 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 NUDT12Q9BQG2 462 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 GPRC5CQ9NQ84 441 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 TMEM216Q9P0N5 145 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 TMCO1Q9UM00 188 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 TRIM38O00635 465 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 RPLP2P05387 115 aaKnown RBP13.22□□□□□ -0.29
RNF43-201ENST00000407977 ARL4DP49703 201 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 KCNJ2P63252 427 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 DPYSL3Q14195 570 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 SQLEQ14534 574 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 RP9Q8TA86 221 aaKnown RBP13.22□□□□□ -0.29
RNF43-201ENST00000407977 REEP1Q9H902 201 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 HPS4Q9NQG7 708 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 LNPEPQ9UIQ6 1025 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 PADI4Q9UM07 663 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 BARX2Q9UMQ3 279 aaPredicted RBP13.22□□□□□ -0.29
RNF43-201ENST00000407977 DMTF1Q9Y222 760 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
RNF43-201ENST00000407977 RGSL1A5PLK6 1076 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 AREL1O15033 823 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 EGFRP00533 1210 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 TSPAN19P0C672 248 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 HALP42357 657 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 PHKG1Q16816 387 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 LRRC19Q9H756 370 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 MIEF1Q9NQG6 463 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 RBM22Q9NW64 420 aaKnown RBP eCLIP13.22□□□□□ -0.296e-7■■■□□ 16.6
RNF43-201ENST00000407977 RPS6KB2Q9UBS0 482 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 PIGNO95427 931 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 SERPINA6P08185 405 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 SERPINF2P08697 491 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 LBPP18428 481 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 MGAT1P26572 445 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 STX4Q12846 297 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 TRAP1Q12931 704 aaKnown RBP13.22□□□□□ -0.29
RNF43-201ENST00000407977 GRIK3Q13003 919 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 FAM187BQ17R55 369 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 MARC1Q5VT66 337 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 ARMC6Q6NXE6 501 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 C11orf74Q86VG3 221 aa13.22□□□□□ -0.29
RNF43-201ENST00000407977 MRPL39Q9NYK5 338 aaKnown RBP13.22□□□□□ -0.29
RNF43-201ENST00000407977 TRIM43BA6NCK2 446 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 RGS14O43566 566 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 SEC24AO95486 1093 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 ZNF846Q147U1 533 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 ZNF284Q2VY69 593 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 ADGRF2Q8IZF7 708 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms