RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 VCPP55072 806 aaKnown RBP21.1■□□□□ 0.97
CHKB-201ENST00000406938 FAM78AQ5JUQ0 283 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 C1orf228Q6PIY5 440 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 TMCO3Q6UWJ1 677 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 NPNTQ6UXI9 565 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 FAM217AQ8IXS0 508 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 C1orf54Q8WWF1 131 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 DDX50Q9BQ39 737 aaKnown RBP21.1■□□□□ 0.97
CHKB-201ENST00000406938 ZYG11BQ9C0D3 744 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 POMKQ9H5K3 350 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 CATSPERBQ9H7T0 1116 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 KIF9Q9HAQ2 790 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 PRDM16Q9HAZ2 1276 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 CD207Q9UJ71 328 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 CDH7Q9ULB5 785 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 ZNF510Q9Y2H8 683 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 NUP210Q8TEM1 1887 aaPredicted RBP21.1■□□□□ 0.97
CHKB-201ENST00000406938 H3BQ06 376 aaPredicted RBP21.09■□□□□ 0.97
CHKB-201ENST00000406938 CCDC188H7C350 402 aa21.09■□□□□ 0.97
CHKB-201ENST00000406938 TRDMT1O14717 391 aaKnown RBP21.09■□□□□ 0.97
CHKB-201ENST00000406938 MFSD11O43934 449 aa21.09■□□□□ 0.97
CHKB-201ENST00000406938 OTUD4Q01804 1114 aaKnown RBP21.09■□□□□ 0.97
CHKB-201ENST00000406938 GBE1Q04446 702 aa21.09■□□□□ 0.97
CHKB-201ENST00000406938 CIR1Q86X95 450 aaPredicted RBP21.09■□□□□ 0.97
CHKB-201ENST00000406938 CELF5Q8N6W0 485 aaKnown RBP21.09■□□□□ 0.97
CHKB-201ENST00000406938 ACTL9Q8TC94 416 aa21.09■□□□□ 0.97
CHKB-201ENST00000406938 P3H4Q92791 437 aa21.09■□□□□ 0.97
CHKB-201ENST00000406938 SMARCD2Q92925 531 aa21.09■□□□□ 0.97
CHKB-201ENST00000406938 HEY1Q9Y5J3 304 aa21.09■□□□□ 0.97
CHKB-201ENST00000406938 DRGXA6NNA5 263 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 PHF2O75151 1096 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 CNTN5O94779 1100 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 SGSHP51688 502 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 CYP1B1Q16678 543 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 C5orf22Q49AR2 442 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 ALFQ53S48 1182 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 RABGAP1LQ5R372 815 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 NLRP14Q86W24 1093 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 NPWQ8N729 165 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 C12orf50Q8NA57 414 aaPredicted RBP21.08■□□□□ 0.97
CHKB-201ENST00000406938 TTC13Q8NBP0 860 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 MYADMQ96S97 322 aa21.08■□□□□ 0.97
CHKB-201ENST00000406938 DDX47Q9H0S4 455 aaKnown RBP21.08■□□□□ 0.97
CHKB-201ENST00000406938 USP15Q9Y4E8 981 aaPredicted RBP21.08■□□□□ 0.97
CHKB-201ENST00000406938 MAP3K6O95382 1288 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 RHOQP17081 205 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 VIPR2P41587 438 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 PAFAH1B3Q15102 231 aaKnown RBP21.07■□□□□ 0.96
CHKB-201ENST00000406938 DENND4AQ7Z401 1863 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 TFAP2DQ7Z6R9 452 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 KLHL7Q8IXQ5 586 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 CFAP52Q8N1V2 620 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 RTL3Q8N8U3 475 aaKnown RBP21.07■□□□□ 0.96
CHKB-201ENST00000406938 NOA1Q8NC60 698 aaKnown RBP21.07■□□□□ 0.96
CHKB-201ENST00000406938 RSPRY1Q96DX4 576 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 NECTIN4Q96NY8 510 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 UBE2ZQ9H832 354 aaPredicted RBP21.07■□□□□ 0.96
CHKB-201ENST00000406938 DTLQ9NZJ0 730 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 ZFP37Q9Y6Q3 630 aaPredicted RBP21.07■□□□□ 0.96
CHKB-201ENST00000406938 GFRA2O00451 464 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 LIASO43766 372 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 TSPAN3O60637 253 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 KCNA5P22460 613 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 RPS24P62847 133 aaKnown RBP21.07■□□□□ 0.96
CHKB-201ENST00000406938 SNX1Q13596 522 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 NOMO1Q15155 1222 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 SKIV2LQ15477 1246 aaKnown RBP21.07■□□□□ 0.96
CHKB-201ENST00000406938 CCNG2Q16589 344 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 SUSD6Q92537 303 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 MAGOHBQ96A72 148 aaKnown RBP21.07■□□□□ 0.96
CHKB-201ENST00000406938 KRT12Q99456 494 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 LRRC19Q9H756 370 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 TRPV4Q9HBA0 871 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 HOMER3Q9NSC5 361 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 NDFIP2Q9NV92 336 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 TMEM248Q9NWD8 314 aa21.07■□□□□ 0.96
CHKB-201ENST00000406938 C5orf42Q9H799 3197 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 WASH4PA8MWX3 477 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 FCARP24071 287 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 GBP2P32456 591 aaPredicted RBP21.06■□□□□ 0.96
CHKB-201ENST00000406938 SERPINB6P35237 376 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 CHKAP35790 457 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 SLC10A2Q12908 348 aaPredicted RBP21.06■□□□□ 0.96
CHKB-201ENST00000406938 TTC27Q6P3X3 843 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 CPXM2Q8N436 756 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 NETO2Q8NC67 525 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 PPM1EQ8WY54 764 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 LRRC3BQ96PB8 259 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 ZNF212Q9UDV6 495 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 DNPEPQ9ULA0 475 aa21.06■□□□□ 0.96
CHKB-201ENST00000406938 CHRNA3P32297 505 aa21.05■□□□□ 0.96
CHKB-201ENST00000406938 NR2C2P49116 596 aa21.05■□□□□ 0.96
CHKB-201ENST00000406938 TTC39BQ5VTQ0 682 aaPredicted RBP21.05■□□□□ 0.96
CHKB-201ENST00000406938 CCDC33Q8N5R6 958 aa21.05■□□□□ 0.96
CHKB-201ENST00000406938 TDRD5Q8NAT2 981 aaKnown RBP21.05■□□□□ 0.96
CHKB-201ENST00000406938 ST13P5Q8NFI4 369 aaPredicted RBP21.05■□□□□ 0.96
CHKB-201ENST00000406938 SLC35B2Q8TB61 432 aa21.05■□□□□ 0.96
CHKB-201ENST00000406938 FRMD8P1Q9BZ68 369 aaPredicted RBP21.05■□□□□ 0.96
CHKB-201ENST00000406938 KLC2Q9H0B6 622 aa21.05■□□□□ 0.96
CHKB-201ENST00000406938 BRWD1Q9NSI6 2320 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms