RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 NPAS3Q8IXF0 933 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 MAML2Q8IZL2 1156 aaPredicted RBP8.64□□□□□ -1.03
GPC3-203ENST00000406757 CMTM8Q8IZV2 173 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 LEMD2Q8NC56 503 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 NETO2Q8NC67 525 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 KCTD6Q8NC69 237 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 ZSCAN18Q8TBC5 510 aaPredicted RBP8.64□□□□□ -1.03
GPC3-203ENST00000406757 SH3RF2Q8TEC5 729 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 COG1Q8WTW3 980 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 USP13Q92995 863 aaPredicted RBP8.64□□□□□ -1.03
GPC3-203ENST00000406757 RSPRY1Q96DX4 576 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 MYEOVQ96EZ4 313 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 PGAP3Q96FM1 320 aaPredicted RBP8.64□□□□□ -1.03
GPC3-203ENST00000406757 HES6Q96HZ4 224 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 SHDQ96IW2 340 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 MS4A14Q96JA4 679 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 CAPZA3Q96KX2 299 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 CALR3Q96L12 384 aaKnown RBP8.64□□□□□ -1.03
GPC3-203ENST00000406757 LRRC3BQ96PB8 259 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 KXD1Q9BQD3 176 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 HEMGNQ9BXL5 484 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 RRAGDQ9NQL2 400 aaPredicted RBP8.64□□□□□ -1.03
GPC3-203ENST00000406757 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.64□□□□□ -1.03
GPC3-203ENST00000406757 SPATA6Q9NWH7 488 aaPredicted RBP8.64□□□□□ -1.03
GPC3-203ENST00000406757 ARHGEF38Q9NXL2 777 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 AP4E1Q9UPM8 1137 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 TLR6Q9Y2C9 796 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 MTF2Q9Y483 593 aaPredicted RBP8.64□□□□□ -1.03
GPC3-203ENST00000406757 JRKLQ9Y4A0 524 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 PCDHA3Q9Y5H8 950 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 HS3ST4Q9Y661 456 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 DENND4CQ5VZ89 1909 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 SPTBN4Q9H254 2564 aa8.64□□□□□ -1.03
GPC3-203ENST00000406757 DOCK8Q8NF50 2099 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 KANSL1LA0AUZ9 987 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 MED19A0JLT2 244 aaPredicted RBP8.63□□□□□ -1.03
GPC3-203ENST00000406757 LRRD1A4D1F6 860 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 CTAGE9A4FU28 777 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 CEP104O60308 925 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 URI1O94763 535 aaPredicted RBP8.63□□□□□ -1.03
GPC3-203ENST00000406757 IGLV3-27P01718 113 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 APOEP02649 317 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 KRT10P13645 584 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 KDELR1P24390 212 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 SLC6A4P31645 630 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 L1CAMP32004 1257 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 CCR1P32246 355 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 NUMBP49757 651 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 TUBP50607 506 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 IRAK1P51617 712 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 CDH6P55285 790 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 RWDD2BP57060 319 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 SLC7A9P82251 487 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 COG7P83436 770 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 MLF2Q15773 248 aaPredicted RBP8.63□□□□□ -1.03
GPC3-203ENST00000406757 KCTD19Q17RG1 926 aaPredicted RBP8.63□□□□□ -1.03
GPC3-203ENST00000406757 SLC44A4Q53GD3 710 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 BOLA3Q53S33 107 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 PIK3R6Q5UE93 754 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 NADSYN1Q6IA69 706 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 RFWD3Q6PCD5 774 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 KLHDC10Q6PID8 442 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 MFSD7Q6UXD7 560 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 DGLUCYQ7Z3D6 616 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 ADAT2Q7Z6V5 191 aaKnown RBP8.63□□□□□ -1.03
GPC3-203ENST00000406757 CCDC50Q8IVM0 306 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 ZNF276Q8N554 614 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 UBL4BQ8N7F7 174 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 RUBCNQ92622 972 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 OSBPL9Q96SU4 736 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 CDK5RAP1Q96SZ6 601 aaKnown RBP8.63□□□□□ -1.03
GPC3-203ENST00000406757 HERPUD2Q9BSE4 406 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 PLA2G2FQ9BZM2 168 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 LINC00597Q9H2U6 94 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 PCDH18Q9HCL0 1135 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 TDP1Q9NUW8 608 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.63□□□□□ -1.03
GPC3-203ENST00000406757 LCMT1Q9UIC8 334 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 AGO1Q9UL18 857 aaKnown RBP8.63□□□□□ -1.03
GPC3-203ENST00000406757 SH3BP1Q9Y3L3 701 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 HBS1LQ9Y450 684 aaKnown RBP8.63□□□□□ -1.03
GPC3-203ENST00000406757 MFHAS1Q9Y4C4 1052 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 RIF1Q5UIP0 2472 aaKnown RBP8.63□□□□□ -1.03
GPC3-203ENST00000406757 FAM186AA6NE01 2351 aa8.63□□□□□ -1.03
GPC3-203ENST00000406757 TCRBV7S2A1N4TA0A589 114 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 CCDC66A2RUB6 948 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 C3orf70A6NLC5 250 aaPredicted RBP8.62□□□□□ -1.03
GPC3-203ENST00000406757 FAM170BA6NMN3 283 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 MIF4GDA9UHW6 222 aaKnown RBP8.62□□□□□ -1.03
GPC3-203ENST00000406757 LAMTOR5O43504 91 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 PSTPIP1O43586 416 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 ACSL4O60488 711 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 GREM1O60565 184 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 ZRANB2O95218 330 aaKnown RBP eCLIP8.62□□□□□ -1.03
GPC3-203ENST00000406757 KRT7P08729 469 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 GOT1P17174 413 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 TACR2P21452 398 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 AMPD1P23109 780 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 IL4RP24394 825 aa8.62□□□□□ -1.03
GPC3-203ENST00000406757 DDX6P26196 483 aaKnown RBP eCLIP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms