RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 RALGAPA2Q2PPJ7 1873 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 POLR2AP24928 1970 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 RBM47A0AV96 593 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 H3BRB1 525 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 ZNF195O14628 629 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 XPO1O14980 1071 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 BUD23O43709 281 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 DAB1O75553 588 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 CD4P01730 458 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 CPA3P15088 417 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PSMB4P28070 264 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 HOXA11P31270 313 aaPredicted RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PAPOLAP51003 745 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 IFRD2Q12894 506 aaPredicted RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PAFAH1B3Q15102 231 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PCBP1Q15365 356 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 FBXO47Q5MNV8 452 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 METTL21CQ5VZV1 264 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 ALKAL1Q6UXT8 129 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 FASTKD5Q7L8L6 764 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 MAVSQ7Z434 540 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 DEFB106AQ8N104 65 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 ZNF560Q96MR9 790 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 SNX25Q9H3E2 840 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 TUT1Q9H6E5 874 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PAPOLBQ9NRJ5 636 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PNPOQ9NVS9 261 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 GDAP2Q9NXN4 497 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 SLC17A6Q9P2U8 582 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PPM1HQ9ULR3 514 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 MFHAS1Q9Y4C4 1052 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PCDHB12Q9Y5F1 795 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 NR2E3Q9Y5X4 410 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 RAD54BQ9Y620 910 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 RPS6KL1Q9Y6S9 549 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 OTOFQ9HC10 1997 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 MEI4A8MW99 385 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 PIRO00625 290 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 H2AFYO75367 372 aaKnown RBP11□□□□□ -0.65
CLIP4-204ENST00000404424 MPOP05164 745 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 LYNP07948 512 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 PDGFRBP09619 1106 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 NOS2P35228 1153 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 PNPLA4P41247 253 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 SERPINB8P50452 374 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 CDC16Q13042 620 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 GRIK4Q16099 956 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 RNF220Q5VTB9 566 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 PDZD4Q76G19 769 aaPredicted RBP11□□□□□ -0.65
CLIP4-204ENST00000404424 BNIPLQ7Z465 357 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 DHDDSQ86SQ9 333 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ANKRD13AQ8IZ07 590 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ZNF567Q8N184 647 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 CCNYQ8ND76 341 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
CLIP4-204ENST00000404424 KBTBD7Q8WVZ9 684 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 NT5C3BQ969T7 300 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 TNIP3Q96KP6 325 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 TSPAN18Q96SJ8 248 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 RBBP8Q99708 897 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 SH3GL3Q99963 347 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 LPIN3Q9BQK8 851 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 SNX15Q9NRS6 342 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 IL1RAPL1Q9NZN1 696 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 CDH22Q9UJ99 828 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 STAP1Q9ULZ2 295 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 KPNA7A9QM74 516 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 TMEM114B3SHH9 223 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ZNF286BP0CG31 522 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ERVK-10P10266 1014 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ACAT1P24752 427 aaKnown RBP11□□□□□ -0.65
CLIP4-204ENST00000404424 LIMK2P53671 638 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ASPHQ12797 758 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 PPIL2Q13356 520 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ITGA9Q13797 1035 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 MARCH8Q5T0T0 291 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 GJC2Q5T442 439 aaPredicted RBP11□□□□□ -0.65
CLIP4-204ENST00000404424 BSPRYQ5W0U4 402 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 NOTUMQ6P988 496 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 MAMDC4Q6UXC1 1216 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 SULF1Q8IWU6 871 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ARHGAP18Q8N392 663 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 GALNT15Q8N3T1 639 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 SLC25A41Q8N5S1 370 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 SLC2A14Q8TDB8 520 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ZFAND2BQ8WV99 257 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 C18orf25Q96B23 403 aaPredicted RBP11□□□□□ -0.65
CLIP4-204ENST00000404424 DCPSQ96C86 337 aaKnown RBP11□□□□□ -0.65
CLIP4-204ENST00000404424 CXCL16Q9H2A7 254 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 PRDM12Q9H4Q4 367 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 BFARQ9NZS9 450 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 SEPT10Q9P0V9 454 aa11□□□□□ -0.65
CLIP4-204ENST00000404424 ERI2A8K979 691 aaKnown RBP10.99□□□□□ -0.65
CLIP4-204ENST00000404424 F5H423 210 aaPredicted RBP10.99□□□□□ -0.65
CLIP4-204ENST00000404424 XPOTO43592 962 aaKnown RBP10.99□□□□□ -0.65
CLIP4-204ENST00000404424 USP1O94782 785 aa10.99□□□□□ -0.65
CLIP4-204ENST00000404424 GNAT1P11488 350 aa10.99□□□□□ -0.65
CLIP4-204ENST00000404424 LMO2P25791 158 aa10.99□□□□□ -0.65
CLIP4-204ENST00000404424 MLH1P40692 756 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms