RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 MFSD3Q96ES6 412 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 PRDM12Q9H4Q4 367 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 POMPQ9Y244 141 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 STX16-NPEPL1H3BU86 382 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 HSPA4LO95757 839 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 EPHA3P29320 983 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 GRIA2P42262 883 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 ARMC3Q5W041 872 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 GALNT15Q8N3T1 639 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 SNX31Q8N9S9 440 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 FAM156AQ8NDB6 213 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 ATP2A3Q93084 1043 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 NMD3Q96D46 503 aaKnown RBP10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 COG4Q9H9E3 785 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 PRMT7Q9NVM4 692 aaPredicted RBP10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 PTPRFP10586 1907 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 F8W8V4 182 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 ITGAXP20702 1163 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 EDNRBP24530 442 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 NUDT2P50583 147 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 GK3PQ14409 553 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 RBBP5Q15291 538 aaKnown RBP10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 CMPK2Q5EBM0 449 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 DEFB106AQ8N104 65 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 SLC2A14Q8TDB8 520 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 SLC35F5Q8WV83 523 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 RTP4Q96DX8 246 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 ZNF670Q9BS34 389 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 EIF2AQ9BY44 585 aaKnown RBP10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 OCEL1Q9H607 264 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 SNX15Q9NRS6 342 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 COPG2Q9UBF2 871 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 SNX10Q9Y5X0 201 aa10.85□□□□□ -0.67
PPP4R1-203ENST00000400556 CPA3P15088 417 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 MAGEA3P43357 314 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 CNPY1Q3B7I2 92 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 MMEL1Q495T6 779 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 NXNQ6DKJ4 435 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 KDELC2Q7Z4H8 507 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 STRA8Q7Z7C7 330 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 SATL1Q86VE3 508 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 CDKL2Q92772 493 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 LENG8Q96PV6 779 aaPredicted RBP10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 CCDC160A6NGH7 325 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 ADM5C9JUS6 153 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 TK2O00142 265 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 PHGDHO43175 533 aaKnown RBP10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 GLRA3O75311 464 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 GCATO75600 419 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 USP2O75604 605 aaPredicted RBP10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 SERPINE1P05121 402 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 AOC1P19801 751 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 MPSTP25325 297 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 ARL4AP40617 200 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 SULT1E1P49888 294 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 ROR2Q01974 943 aaKnown RBP10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 ZNF460Q14592 562 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 CERCAMQ5T4B2 595 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 RIOX2Q8IUF8 465 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 MCUQ8NE86 351 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 AFG1LQ8WV93 481 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 SMARCAD1Q9H4L7 1026 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 CYP3A43Q9HB55 503 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 KLHL8Q9P2G9 620 aaPredicted RBP10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 SIP14410 1827 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 A0A0A0MRY4 1105 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 HBP1O60381 514 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 ATP6V1B1P15313 513 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 RXRBP28702 533 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 ABCE1P61221 599 aaKnown RBP10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 MRPS22P82650 360 aaKnown RBP10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 MED21Q13503 144 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 FBXL19Q6PCT2 694 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 ZNF567Q8N184 647 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 SGF29Q96ES7 293 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 SPATA13Q96N96 652 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 NUF2Q9BZD4 464 aa10.84□□□□□ -0.67
PPP4R1-203ENST00000400556 FAM72CH0Y354 149 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 JUNP05412 331 aaKnown RBP10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 TGFB3P10600 412 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 SERPINB9P50453 376 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 BTKQ06187 659 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 ADIGQ0VDE8 80 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 SEMA5AQ13591 1074 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 FAM72AQ5TYM5 149 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 FAM72DQ6L9T8 149 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 FAM72BQ86X60 149 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 GALNT4Q8N4A0 578 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 USP33Q8TEY7 942 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 QKIQ96PU8 341 aaKnown RBP eCLIP10.83□□□□□ -0.688e-10■■■■□ 19.6
PPP4R1-203ENST00000400556 NXF3Q9H4D5 531 aaKnown RBP10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 CDHR5Q9HBB8 845 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 APPL1Q9UKG1 709 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 INPP5FQ9Y2H2 1132 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 MDM4O15151 490 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 BIRC5O15392 142 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 TSPAN1O60635 241 aa10.83□□□□□ -0.68
PPP4R1-203ENST00000400556 BEST1O76090 585 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms