RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 RBBP8Q99708 897 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 REEP2Q9BRK0 252 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 CBWD1Q9BRT8 395 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 RANBP17Q9H2T7 1088 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 CHMP2BQ9UQN3 213 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 DNAJC16Q9Y2G8 782 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 PTPRUQ92729 1446 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 ZBTB22O15209 634 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 UBTFL6P0CB48 400 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 COPZ1P61923 177 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 TMC5Q6UXY8 1006 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 SYDE1Q6ZW31 735 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 NEK10Q6ZWH5 1172 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 ZNF669Q96BR6 464 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 THUMPD3Q9BV44 507 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 SIRPGQ9P1W8 387 aa11.21□□□□□ -0.61
CACNA1C-210ENST00000399606 GAKO14976 1311 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 AIM2O14862 343 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 MTSS1O43312 755 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 TBL1XO60907 577 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 IGFALSP35858 605 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 PSMD8P48556 350 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 CCNG1P51959 295 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 VGLL4Q14135 290 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 RASGRP3Q8IV61 690 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 DDHD1Q8NEL9 900 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 SGF29Q96ES7 293 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 ECSITQ9BQ95 431 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 OSBPL2Q9H1P3 480 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 PXMP2Q9NR77 195 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 IMPAD1Q9NX62 359 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 ACRP10323 421 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 TYMPP19971 482 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 POU1F1P28069 291 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 HNRNPH1P31943 449 aaKnown RBP11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 NUDT2P50583 147 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 NUP107P57740 925 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 PHF19Q5T6S3 580 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 SLFN11Q7Z7L1 901 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 CBWD2Q8IUF1 395 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 ADGRG2Q8IZP9 1017 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 ING5Q8WYH8 240 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 C11orf49Q9H6J7 331 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 AAR2Q9Y312 384 aaKnown RBP11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 ALG6Q9Y672 507 aa11.21□□□□□ -0.62
CACNA1C-210ENST00000399606 PRCPP42785 496 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 FLT3LGP49771 235 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 SP2Q02086 613 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 PPATQ06203 517 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 RABL6Q3YEC7 729 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 KLHL35Q6PF15 583 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 C16orf86Q6ZW13 317 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 SGMS1Q86VZ5 419 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 MB21D2Q8IYB1 491 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 APBA2Q99767 749 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 TRBV23OR9-2A0A075B6M9 112 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 GJB1P08034 283 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 GSSP48637 474 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 BCAT1P54687 386 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 ZNF618Q5T7W0 954 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 GPR158Q5T848 1215 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 AGBL2Q5U5Z8 902 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 IQSEC1Q6DN90 963 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 OR8D1Q8WZ84 308 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 CNDP1Q96KN2 507 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 FTHL17Q9BXU8 183 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 PIF1Q9H611 641 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 CLIC5Q9NZA1 410 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 SF3B1O75533 1304 aaKnown RBP eCLIP11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 CPED1A4D0V7 1026 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 NT5C1B-RDH14C9J2C7 533 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 HSPA13P48723 471 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 TTC33Q6PID6 262 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 KDM7AQ6ZMT4 941 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 LRRC49Q8IUZ0 686 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 IL12RB2Q99665 862 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 DMTF1Q9Y222 760 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 KLHL20Q9Y2M5 609 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 PTPRMP28827 1452 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 NEDD8-MDP1E9PL57 170 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 TRIM24O15164 1050 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 TFPIP10646 304 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 CCR1P32246 355 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 RPA3P35244 121 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 SPRP35270 261 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 DMWDQ09019 674 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 ALX1Q15699 326 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 DPY30Q9C005 99 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 LY9Q9HBG7 655 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 NR2E1Q9Y466 385 aa11.2□□□□□ -0.62
CACNA1C-210ENST00000399606 TRDMT1O14717 391 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms