RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SMUG1Q53HV7 270 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 TOR1AIP1Q5JTV8 583 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 MPP7Q5T2T1 576 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 KCTD16Q68DU8 428 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 KLHL7Q8IXQ5 586 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 SCFD1Q8WVM8 642 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 ANKS1AQ92625 1134 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 DNAJC19Q96DA6 116 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 CITED2Q99967 270 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 REEP2Q9BRK0 252 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 LRRC1Q9BTT6 524 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 THUMPD3Q9BV44 507 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 CENPHQ9H3R5 247 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 PCIF1Q9H4Z3 704 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 PARVGQ9HBI0 331 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 PRDM9Q9NQV7 894 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 WBP1LQ9NX94 342 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 IGSF9Q9P2J2 1179 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 SUFUQ9UMX1 484 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 CARD8Q9Y2G2 431 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 MED16Q9Y2X0 877 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 PCDHA13Q9Y5I0 950 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 MEIS2O14770 477 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 TBC1D4O60343 1298 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 EGFRP00533 1210 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 LAMP2P13473 410 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 IL10P22301 178 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 MMP16P51512 607 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 MRPL12P52815 198 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 SOX10P56693 466 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 ADAM9Q13443 819 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 CNKSR3Q6P9H4 555 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 UNC13DQ70J99 1090 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 SESTD1Q86VW0 696 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 HID1Q8IV36 788 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 P3H2Q8IVL5 708 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM217AQ8IXS0 508 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 ARL14Q8N4G2 192 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 DAGLBQ8NCG7 672 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 ARRDC4Q8NCT1 418 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 LILRB4Q8NHJ6 448 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZNF566Q969W8 418 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 AGAP2Q99490 1192 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 TTYH3Q9C0H2 523 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 COA1Q9GZY4 146 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 COQ6Q9Y2Z9 468 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 CCL27Q9Y4X3 112 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 CORINQ9Y5Q5 1042 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 ASTN2O75129 1339 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZNF646O15015 1829 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRAV6A0A075B6T7 132 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 A0A087X0T9 212 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 SPDYE3A6NKU9 549 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 YDJCA8MPS7 323 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 SCAMP1O15126 338 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 VILLO15195 856 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM228BP0C875 321 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TROVE2P10155 538 aaKnown RBP eCLIP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 CYLC1P35663 651 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 BUD31P41223 144 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PNLIPRP1P54315 467 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 MORF4L2Q15014 288 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TBCEQ15813 527 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 HFEQ30201 348 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 ASPRV1Q53RT3 343 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 FBXO48Q5FWF7 155 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 FAM182AQ5T1J6 154 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 FYB2Q5VWT5 728 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 CES4AQ5XG92 561 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 MON1AQ86VX9 555 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 HDDC3Q8N4P3 179 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRIM58Q8NG06 486 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 MRGPRX3Q96LB0 322 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TWNKQ96RR1 684 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRIM31Q9BZY9 425 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 ST6GALNAC4Q9H4F1 302 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 GORASP2Q9H8Y8 452 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TMPRSS4Q9NRS4 437 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 ATAD3AQ9NVI7 634 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 LCMT1Q9UIC8 334 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 SPO11Q9Y5K1 396 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 DDX60LQ5H9U9 1706 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 ROBO3Q96MS0 1386 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 ABCB11O95342 1321 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 H0YIV9 168 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 EBAG9O00559 213 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 KRT86O43790 486 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 CKMP06732 381 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TPOP07202 933 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 OSMP13725 252 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 KLRC1P26715 233 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 PRKAR1BP31321 381 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 ABCG1P45844 678 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 SRSF2Q01130 221 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRIM32Q13049 653 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 BYSLQ13895 437 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 RCN1Q15293 331 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 AAK1Q2M2I8 961 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 SMU1Q2TAY7 513 aa6.42□□□□□ -1.38
TRAPPC13-202ENST00000399438 CENPPQ6IPU0 288 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms