RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 XRCC4Q13426 336 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 PPIGQ13427 754 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00243-201ENST00000399196 QPCTQ16769 361 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 SLC8B1Q6J4K2 584 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 BZW1Q7L1Q6 419 aaKnown RBP9.71□□□□□ -0.86
LINC00243-201ENST00000399196 SLC39A11Q8N1S5 342 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 COLGALT1Q8NBJ5 622 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 ZBED2Q9BTP6 218 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 CRISPLD1Q9H336 500 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 PRDM12Q9H4Q4 367 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 KIF9Q9HAQ2 790 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 GMIPQ9P107 970 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 PAK5Q9P286 719 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 NEU3Q9UQ49 428 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 BACE2Q9Y5Z0 518 aa9.71□□□□□ -0.86
LINC00243-201ENST00000399196 MRPL42Q9Y6G3 142 aaKnown RBP9.71□□□□□ -0.86
LINC00243-201ENST00000399196 EXOC1LA0A1B0GW35 172 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 WDR27A2RRH5 827 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CFAP69A5D8W1 941 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 ADAM12O43184 909 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 IRAK2O43187 625 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 MSI1O43347 362 aaKnown RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CDH16O75309 829 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 GCATO75600 419 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 FGBP02675 491 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 URODP06132 367 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 APRTP07741 180 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CCR1P32246 355 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CCT5P48643 541 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 USP46P62068 366 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 WASHC5Q12768 1159 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 PAFAH1B3Q15102 231 aaKnown RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 PRKD1Q15139 912 aaPredicted RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 C3orf62Q6ZUJ4 267 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 NLRP14Q86W24 1093 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CDKL3Q8IVW4 592 aaPredicted RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 FBF1Q8TES7 1133 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 PYROXD1Q8WU10 500 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 DPF3Q92784 378 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 SPATA17Q96L03 361 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 TTC25Q96NG3 672 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 XPO6Q96QU8 1125 aaKnown RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CCT8L2Q96SF2 557 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 EPAS1Q99814 870 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 HTATIP2Q9BUP3 242 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 VN1R3Q9BXE9 311 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 PHACTR1Q9C0D0 580 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 SMOC2Q9H3U7 446 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 RC3H2Q9HBD1 1191 aaKnown RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 MLXIPLQ9NP71 852 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 TLR8Q9NR97 1041 aaKnown RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CXXC1Q9P0U4 656 aaPredicted RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 OR12D3Q9UGF7 316 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 SFMBT1Q9UHJ3 866 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 MAGED2Q9UNF1 606 aaPredicted RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 TMEM120BA0PK00 339 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 C5orf60A6NFR6 353 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 LRIG2O94898 1065 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 DNAJB2P25686 324 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CA8P35219 290 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 PPM1AP35813 382 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 MAGEA3P43357 314 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 TUFMP49411 452 aaKnown RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 FPGSQ05932 587 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 TAF10Q12962 218 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 LRRC14Q15048 493 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 TMED2Q15363 201 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 PDZD4Q76G19 769 aaPredicted RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CROCCP2Q86T23 111 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 PRPF39Q86UA1 669 aaKnown RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 SRRM1Q8IYB3 904 aaKnown RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 PDIK1LQ8N165 341 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 MPP5Q8N3R9 675 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 DEPDC1BQ8WUY9 529 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 HTR3CQ8WXA8 447 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 CASP10Q92851 521 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 P2RY11Q96G91 374 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 SERPINB11Q96P15 392 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 ZNF317Q96PQ6 595 aaPredicted RBP9.7□□□□□ -0.86
LINC00243-201ENST00000399196 GORASP1Q9BQQ3 440 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 SIK2Q9H0K1 926 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 PCDHB12Q9Y5F1 795 aa9.7□□□□□ -0.86
LINC00243-201ENST00000399196 DOCK4Q8N1I0 1966 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 A0A1W2PPM1 405 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 EFEMP2O95967 443 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 PSEN1P49768 467 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 ZNF135P52742 658 aaPredicted RBP9.69□□□□□ -0.86
LINC00243-201ENST00000399196 DSG1Q02413 1049 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 CBLBQ13191 982 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 OLIG2Q13516 323 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 TAF12Q16514 161 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 BRMS1LQ5PSV4 323 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 ANKRD20A2Q5SQ80 823 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 TMEM240Q5SV17 173 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 ANKRD20A1Q5TYW2 823 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 ANKRD20A3Q5VUR7 823 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 HEATR6Q6AI08 1181 aaKnown RBP9.69□□□□□ -0.86
LINC00243-201ENST00000399196 CEP128Q6ZU80 1094 aa9.69□□□□□ -0.86
LINC00243-201ENST00000399196 DDX53Q86TM3 631 aaKnown RBP9.69□□□□□ -0.86
LINC00243-201ENST00000399196 TRABD2AQ86V40 505 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms