RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 DLDP09622 509 aaKnown RBP13.89□□□□□ -0.19
VCX3A-202ENST00000398729 SLC2A3P11169 496 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 ACADMP11310 421 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 CD6P30203 668 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 CD70P32970 193 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 RPS24P62847 133 aaKnown RBP13.89□□□□□ -0.19
VCX3A-202ENST00000398729 CDH18Q13634 790 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 ACAP1Q15027 740 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 TAF5Q15542 800 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 DUOXA1Q1HG43 343 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 ZC3H12AQ5D1E8 599 aaKnown RBP13.89□□□□□ -0.19
VCX3A-202ENST00000398729 KLHDC7AQ5VTJ3 777 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 PEAR1Q5VY43 1037 aaPredicted RBP13.89□□□□□ -0.19
VCX3A-202ENST00000398729 OR6B2Q6IFH4 312 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 DPY19L2P1Q6NXN4 242 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 SLC23A3Q6PIS1 610 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
VCX3A-202ENST00000398729 RABEPKQ7Z6M1 372 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 CHSY1Q86X52 802 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 DEFB106AQ8N104 65 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 CARNMT1Q8N4J0 409 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 ATP6V0D2Q8N8Y2 350 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 OR2T3Q8NH03 318 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 FIBINQ8TAL6 211 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 CEP76Q8TAP6 659 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 WFDC5Q8TCV5 224 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 GPT2Q8TD30 523 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 FOXJ1Q92949 421 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 BTN2A3PQ96KV6 586 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 HSPA12BQ96MM6 686 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 FAM204AQ9H8W3 233 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 CD93Q9NPY3 652 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 ITM2CQ9NQX7 267 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.89□□□□□ -0.19
VCX3A-202ENST00000398729 TAB2Q9NYJ8 693 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 FHOD1Q9Y613 1164 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 LUC7L3O95232 432 aaKnown RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 ERBB2P04626 1255 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 CFIP05156 583 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 TPM2P07951 284 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 HLA-EP13747 358 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 UCHL3P15374 230 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 CYP11B1P15538 503 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 ABCB4P21439 1286 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 OXTRP30559 389 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 CCR1P32246 355 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 TPMTP51580 245 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 COPAP53621 1224 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 PITX1P78337 314 aaPredicted RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 EIF4EBP2Q13542 120 aaPredicted RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 CAMK2GQ13555 558 aaPredicted RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 PTPRNQ16849 979 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 PTPN20Q4JDL3 420 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 SYCP2LQ5T4T6 812 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 RAP1GAP2Q684P5 730 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 OLFML1Q6UWY5 402 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 RBM43Q6ZSC3 357 aaKnown RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 FAM183BPQ6ZVS7 135 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 ZDHHC17Q8IUH5 632 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 SLC41A1Q8IVJ1 513 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 LGI2Q8N0V4 545 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 CFAP52Q8N1V2 620 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 TMEM35BQ8NCS4 154 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 ZCCHC14Q8WYQ9 949 aaKnown RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 RNF34Q969K3 372 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 TOE1Q96GM8 510 aaKnown RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 ZNF419Q96HQ0 510 aaPredicted RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 SLC2A13Q96QE2 648 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 FBRSQ9HAH7 460 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 DDIT4Q9NX09 232 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 WSB2Q9NYS7 404 aaPredicted RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 XPO7Q9UIA9 1087 aaKnown RBP13.88□□□□□ -0.19
VCX3A-202ENST00000398729 KLK13Q9UKR3 277 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 MSRB2Q9Y3D2 182 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 NEUROG3Q9Y4Z2 214 aa13.88□□□□□ -0.19
VCX3A-202ENST00000398729 HELZ2Q9BYK8 2649 aaKnown RBP13.87□□□□□ -0.19
VCX3A-202ENST00000398729 MUC22E2RYF6 1773 aaPredicted RBP13.87□□□□□ -0.19
VCX3A-202ENST00000398729 SYNJ2BP-COX16A0A087WUM0 186 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 SPAARA0A1B0GVQ0 90 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 FAM221BA6H8Z2 402 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 KCNU1A8MYU2 1149 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 F5H5T6 163 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 H0Y626 953 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 GRAP2O75791 330 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 MOCS3O95396 460 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 ASLP04424 464 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 ENGP17813 658 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 TACR2P21452 398 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 ST8SIA6P61647 398 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 FAM193AP78312 1265 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 SLC6A3Q01959 620 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 GFPT1Q06210 699 aaPredicted RBP13.87□□□□□ -0.19
VCX3A-202ENST00000398729 MTA1Q13330 715 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 SASS6Q6UVJ0 657 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 SLC26A9Q7LBE3 791 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 CACUL1Q86Y37 369 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 RGL4Q8IZJ4 473 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 ZNF366Q8N895 744 aa13.87□□□□□ -0.19
VCX3A-202ENST00000398729 MYEOVQ96EZ4 313 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms