RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 GPR20Q99678 358 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 GPAMQ9HCL2 828 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 KRCC1Q9NPI7 259 aaPredicted RBP14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 CASZ1Q86V15 1759 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 RBAK-RBAKDNI3L0D1 243 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 PSMD10O75832 226 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 USP17L7P0C7H9 530 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 GRIK3Q13003 919 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 RETSATQ6NUM9 610 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 ILDR2Q71H61 639 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 COLGALT1Q8NBJ5 622 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 LRRC40Q9H9A6 602 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 STK39Q9UEW8 545 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 SMIM22K7EJ46 135 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 SLC9A3R1O14745 358 aaPredicted RBP14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 IGSF6O95976 241 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 GLUD1P00367 558 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 PTPN11Q06124 597 aaPredicted RBP14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 KIAA0319LQ8IZA0 1049 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 TSPAN16Q9UKR8 245 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 SPATA31D3P0C874 917 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 ZNF23P17027 643 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 PAX3P23760 479 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 PSMA4P25789 261 aaKnown RBP14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 DYNC1I2Q13409 638 aaKnown RBP14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 XRCC4Q13426 336 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 NFYCQ13952 458 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 CCL14Q16627 93 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 WLSQ5T9L3 541 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 SPOCD1Q6ZMY3 1216 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 SPATA31D4Q6ZUB0 917 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 FAM124AQ86V42 546 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 FBXL16Q8N461 479 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 RBM22Q9NW64 420 aaKnown RBP eCLIP14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 BARX2Q9UMQ3 279 aaPredicted RBP14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 IGF2BP3O00425 579 aaKnown RBP eCLIP14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 RRM2P31350 389 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 TOB1P50616 345 aaPredicted RBP14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 OLFML2BQ68BL8 750 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 ERGIC2Q96RQ1 377 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 OSGEPQ9NPF4 335 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 PHTF1Q9UMS5 762 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 LGR5O75473 907 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 HNRNPCP07910 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 PSMD5Q16401 504 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 SETMARQ53H47 684 aaPredicted RBP14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 TATDN2Q93075 761 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 SENP8Q96LD8 212 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 RBPJLQ9UBG7 517 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 ANXA11P50995 505 aaKnown RBP14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 CCNG1P51959 295 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 RAB30Q15771 203 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 INTS13Q9NVM9 706 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 KLF15Q9UIH9 416 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 ATP6V1B1P15313 513 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 AMD1P17707 334 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 SETD3Q86TU7 594 aaPredicted RBP14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 LRRC6Q86X45 466 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 RSPH9Q9H1X1 276 aaPredicted RBP14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 RNPEPQ9H4A4 650 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 MIEF1Q9NQG6 463 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 ENO2P09104 434 aaPredicted RBP14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 GLRA2P23416 452 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 RANBP1P43487 201 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 MAPK7Q13164 816 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 TMEM159Q96B96 161 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 MYOCQ99972 504 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 DCLK3Q9C098 648 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 MRGBPQ9NV56 204 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 HEY2Q9UBP5 337 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 TNFSF13BQ9Y275 285 aa14.55□□□□□ -0.08
PCDHA11-201ENST00000398640 MEI4A8MW99 385 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 O00370 1275 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 SMNDC1O75940 238 aaKnown RBP eCLIP14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 MICAL2O94851 1124 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ACRP10323 421 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 MAPK1P28482 360 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 BMPR2Q13873 1038 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ZNF697Q5TEC3 545 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 CXorf40AQ8TE69 158 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 CASP10Q92851 521 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 EVA1BQ9NVM1 165 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 LINC00854A0A1B0GVQ3 168 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 SH3BGRLO75368 114 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 RENBPP51606 427 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 MARC1Q5VT66 337 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 DCLRE1AQ6PJP8 1040 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 BRSK2Q8IWQ3 736 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ZNF786Q8N393 782 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 SLC2A14Q8TDB8 520 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 PIK3R5Q8WYR1 880 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ELOVL6Q9H5J4 265 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 GPSM3Q9Y4H4 160 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 SHPRHQ149N8 1683 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 TIMM44O43615 452 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ATP5BP06576 529 aaKnown RBP14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 ATP6V1B2P21281 511 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 PTPN3P26045 913 aa14.54□□□□□ -0.08
PCDHA11-201ENST00000398640 SH3D19Q5HYK7 790 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms