RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 FAM171A1Q5VUB5 890 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 EEF1DP3Q658K8 133 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 JADE1Q6IE81 842 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 TRIM72Q6ZMU5 477 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 TRIM67Q6ZTA4 783 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 LIX1LQ8IVB5 337 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 MFSD6LQ8IWD5 586 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 OR8H2Q8N162 312 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 NAXEQ8NCW5 288 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 CLDN23Q96B33 292 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 ZNF707Q96C28 371 aaPredicted RBP3.96□□□□□ -1.77
UBE3A-202ENST00000397954 EPSTI1Q96J88 318 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 SENP8Q96LD8 212 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 PPP1R9BQ96SB3 815 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 PPP1R16BQ96T49 567 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 HNRNPABQ99729 332 aaKnown RBP3.96□□□□□ -1.77
UBE3A-202ENST00000397954 VN1R3Q9BXE9 311 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 ARFGAP3Q9NP61 516 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 GJB4Q9NTQ9 266 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 DNAJC28Q9NX36 388 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 DONSONQ9NYP3 566 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 IFT80Q9P2H3 777 aaPredicted RBP3.96□□□□□ -1.77
UBE3A-202ENST00000397954 CBLCQ9ULV8 474 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 BARX2Q9UMQ3 279 aaPredicted RBP3.96□□□□□ -1.77
UBE3A-202ENST00000397954 ARHGAP26Q9UNA1 814 aa3.96□□□□□ -1.77
UBE3A-202ENST00000397954 A0A087WV62 115 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 A0A0A0MRY4 1105 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 IRAK2O43187 625 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 TGFB1I1O43294 461 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 C4BPAP04003 597 aaKnown RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 DNAJB1P25685 340 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 ADSSP30520 456 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 HOXD12P35452 270 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 CLCNKBP51801 687 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 VAMP7P51809 220 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 AIF1P55008 147 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 TPM4P67936 248 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 MPP1Q00013 466 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 ZRSR1Q15695 479 aaKnown RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 CCDC38Q502W7 563 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 SPECC1Q5M775 1068 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 LMBRD2Q68DH5 695 aaPredicted RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 RNF43Q68DV7 783 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 NPNTQ6UXI9 565 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 PDZD4Q76G19 769 aaPredicted RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 CCDC186Q7Z3E2 898 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 KSR1Q8IVT5 923 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 ADGRF2Q8IZF7 708 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 FBXL6Q8N531 539 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 ZSCAN18Q8TBC5 510 aaPredicted RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 IPO4Q8TEX9 1081 aaKnown RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 FRS2Q8WU20 508 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 PPP1R13LQ8WUF5 828 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 NUDT8Q8WV74 236 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 SMG7Q92540 1137 aaKnown RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 SMARCD2Q92925 531 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 ACDQ96AP0 544 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 DHX58Q96C10 678 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 KLHDC7BQ96G42 594 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 HSFY1Q96LI6 401 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 UBXN10Q96LJ8 280 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 SNX25Q9H3E2 840 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 CLSTN2Q9H4D0 955 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 DMAP1Q9NPF5 467 aaPredicted RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 SLC6A14Q9UN76 642 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 LRCH1Q9Y2L9 728 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 CRYL1Q9Y2S2 319 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 YIPF1Q9Y548 306 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 SCN1AP35498 2009 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 TICRRQ7Z2Z1 1910 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 TNRC6BQ9UPQ9 1833 aaKnown RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 MUC22E2RYF6 1773 aaPredicted RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 WDR27A2RRH5 827 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 MTMR11A4FU01 709 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 CYB561D2O14569 222 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 DDX3YO15523 660 aaKnown RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 B3GALT2O43825 422 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 KDM1AO60341 852 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 GDF9O60383 454 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 EXOC3O60645 756 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 TUSC2O75896 110 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 UBXN7O94888 489 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 LSM8O95777 96 aaKnown RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 ZDHHC11BP0C7U3 371 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 CXCL8P10145 99 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 LAMP2P13473 410 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 MYOGP15173 224 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 DESP17661 470 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 DRD1P21728 446 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 PTGS1P23219 599 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 OCRLQ01968 901 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 C19orf57Q0VDD7 668 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 PAK1Q13153 545 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 DMC1Q14565 340 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 TAF5Q15542 800 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 PAN2Q504Q3 1202 aaKnown RBP3.96□□□□□ -1.78
UBE3A-202ENST00000397954 MPP7Q5T2T1 576 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 TRAPPC11Q7Z392 1133 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 MON1AQ86VX9 555 aa3.96□□□□□ -1.78
UBE3A-202ENST00000397954 HID1Q8IV36 788 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms