RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 RFX8Q6ZV50 586 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ANKS1BQ7Z6G8 1248 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 SLC44A3Q8N4M1 653 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 HJURPQ8NCD3 748 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ATP2A3Q93084 1043 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RNF25Q96BH1 459 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TMA16Q96EY4 203 aaKnown RBP20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CSPG4P5Q96PW8 444 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ASB2Q96Q27 587 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 NAPGQ99747 312 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 EBF3Q9H4W6 596 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 UNC80Q8N2C7 3258 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 PENKP01210 267 aaPredicted RBP20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ASGR2P07307 311 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 PYGMP11217 842 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CDKN2BP42772 138 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 RPS24P62847 133 aaKnown RBP20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 MMRN1Q13201 1228 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 DHCR24Q15392 516 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ODF2Q5BJF6 829 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 LY6G5CQ5SRR4 150 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 MPP7Q5T2T1 576 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 SPOCD1Q6ZMY3 1216 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TPGS1Q6ZTW0 290 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TMEM25Q86YD3 366 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CFAP52Q8N1V2 620 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CALN1Q9BXU9 219 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ZYG11BQ9C0D3 744 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CARD9Q9H257 536 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 DNAI1Q9UI46 699 aa20.07■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TYW5A2RUC4 315 aaKnown RBP20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 FGF10O15520 208 aaPredicted RBP20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CNTN5O94779 1100 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TUBB4AP04350 444 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CYBBP04839 570 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 COL4A2P08572 1712 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 RHOQP17081 205 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 EPHB2P29323 1055 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 PTPN7P35236 360 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 COPS2P61201 443 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TNK2Q07912 1038 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 PPP2R5EQ16537 467 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ALFQ53S48 1182 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ANKRD20A8PQ5CZ79 823 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 RWDD4Q6NW29 188 aaKnown RBP20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 SYT10Q6XYQ8 523 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CHST9Q7L1S5 443 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 NLRP14Q86W24 1093 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CIR1Q86X95 450 aaPredicted RBP20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 RETREG1Q9H6L5 497 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 BRD9Q9H8M2 597 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ECT2Q9H8V3 914 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ARHGEF4Q9NR80 690 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 MPP6Q9NZW5 540 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ZNF212Q9UDV6 495 aa20.06■□□□□ 0.8
MAP1LC3A-203ENST00000397709 hCG_1818297A0A087WSY0 165 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 A0A1B0GVM2 712 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CTAGE9A4FU28 777 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TCAF2A6NFQ2 919 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 OTOL1A6NHN0 477 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 WASH4PA8MWX3 477 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ESPNB1AK53 854 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 KIF2AO00139 706 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 KCNK3O14649 394 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 HOXC11O43248 304 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TBL1XO60907 577 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ADH1CP00326 375 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 HOXD9P28356 352 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CDH4P55283 916 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ZNF211Q13398 564 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 RUNX3Q13761 415 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 PAPD7Q5XG87 772 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 AADACL2Q6P093 401 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CCDC50Q8IVM0 306 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CPA6Q8N4T0 437 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 PCDH19Q8TAB3 1148 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 DDI1Q8WTU0 396 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 RNF157Q96PX1 679 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 PSMB7Q99436 277 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 BBS2Q9BXC9 721 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CATSPERBQ9H7T0 1116 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TMEM248Q9NWD8 314 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 STIM2Q9P246 746 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 SNX12Q9UMY4 172 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 MYOFQ9NZM1 2061 aa20.05■□□□□ 0.8
MAP1LC3A-203ENST00000397709 DCLK1O15075 740 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 DAPK3O43293 454 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CLDN11O75508 207 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ADH5P11766 374 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ERCC2P18074 760 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 AMPD1P23109 780 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 CASQ1P31415 396 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 GAD2Q05329 585 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TDGQ13569 410 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 GAB4Q2WGN9 574 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 ANO4Q32M45 955 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 TFDP3Q5H9I0 405 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 PQLC3Q8N755 202 aa20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 RTL3Q8N8U3 475 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3A-203ENST00000397709 BHMTQ93088 406 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms