RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SCAMP5Q8TAC9 235 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 SIGLEC10Q96LC7 697 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 HSFY1Q96LI6 401 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 APBA2Q99767 749 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 CHRAC1Q9NRG0 131 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 EURLQ9NYK6 297 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 ZMYND8Q9ULU4 1186 aaPredicted RBP10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 PCDHA11Q9Y5I1 949 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 MT-CO1P00395 513 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 LTFP02788 710 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 MAP2K5Q13163 448 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 CRYMQ14894 314 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 DPYSL2Q16555 572 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC9A4Q6AI14 798 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 MAMDC4Q6UXC1 1216 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 ISLR2Q6UXK2 745 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 CLEC20AQ6ZU45 233 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 ZDHHC17Q8IUH5 632 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 C10orf107Q8IVU9 208 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 ARHGAP24Q8N264 748 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 ANKLE1Q8NAG6 615 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 CXorf38Q8TB03 319 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 ZC3H15Q8WU90 426 aaKnown RBP10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 TEKT4Q8WW24 435 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 OSBPL1AQ9BXW6 950 aa10.71□□□□□ -0.7
CPSF1P1-201ENST00000397477 PRR5-ARHGAP8B1AHC4 643 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 PDE5AO76074 875 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 ADRA1BP35368 520 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 FDFT1P37268 417 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 NR2C2P49116 596 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 ARHGAP8P85298 464 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC25A3Q00325 362 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 CUL3Q13618 768 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 PACS1Q6VY07 963 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 FAM35AQ86V20 835 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 ABT1Q9ULW3 272 aaKnown RBP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 SMIM35A0A1B0GVV1 85 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 MYADML2A6NDP7 307 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 E7ESA3 106 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 XPO1O14980 1071 aaKnown RBP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 ITM2AO43736 263 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 ITGA2BP08514 1039 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC1A6P48664 564 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 SERPINB9P50453 376 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 KHDC1Q4VXA5 237 aaKnown RBP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 BTBD10Q9BSF8 475 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 VRTNQ9H8Y1 702 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 FAM105AQ9NUU6 356 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 MPP6Q9NZW5 540 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 BUD23O43709 281 aaKnown RBP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 MT-CYBP00156 380 aaPredicted RBP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 PTPN9P43378 593 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 CDC42EP1Q00587 391 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 FAM110CQ1W6H9 321 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 LDLRAD1Q5T700 205 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 SPRYD7Q5W111 196 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 LMNTD2Q8IXW0 634 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 OR6P1Q8NGX9 317 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC26A7Q8TE54 656 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 GTF3C2Q8WUA4 911 aaPredicted RBP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 UTP4Q969X6 686 aaKnown RBP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 QKIQ96PU8 341 aaKnown RBP eCLIP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 CADM1Q9BY67 442 aaKnown RBP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 NACA2Q9H009 215 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 SLC24A3Q9HC58 644 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 FZD10Q9ULW2 581 aa10.7□□□□□ -0.7
CPSF1P1-201ENST00000397477 PRRC2BQ5JSZ5 2229 aaKnown RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 RALBP11234 206 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 MX2P20592 715 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 CA8P35219 290 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 OR1G1P47890 313 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 CACNA2D1P54289 1103 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 RNF148Q8N7C7 305 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 MYLPFQ96A32 169 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 MS4A4AQ96JQ5 239 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 MARK4Q96L34 752 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 OMDQ99983 421 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 CYP4F12Q9HCS2 524 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 MIOSQ9NXC5 875 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 TMEM216Q9P0N5 145 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 COL1A2P08123 1366 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 A0A096LPK6 155 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 F8W810 466 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 TRDMT1O14717 391 aaKnown RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 AIM2O14862 343 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 RFPL1O75677 317 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 VAPBO95292 243 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 T-ENOLP0DO92 83 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 SERPINB5P36952 375 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 CTBP1Q13363 440 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 SWT1Q5T5J6 900 aaKnown RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 ATPAF2Q8N5M1 289 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 CERS2Q96G23 380 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 FRMD8Q9BZ67 464 aaPredicted RBP10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 LRMDAQ9H2I8 198 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 CRTAC1Q9NQ79 661 aa10.69□□□□□ -0.7
CPSF1P1-201ENST00000397477 MTMR10Q9NXD2 777 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms