RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 GBP2P32456 591 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 DYNLT1P63172 113 aa24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 TUBB4BP68371 445 aa24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 PAFAH1B3Q15102 231 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 FAM78AQ5JUQ0 283 aa24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 OTOP3Q7RTS5 596 aa24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 RTL3Q8N8U3 475 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 HJURPQ8NCD3 748 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 TTC16Q8NEE8 873 aa24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 POMKQ9H5K3 350 aa24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 NEU3Q9UQ49 428 aa24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 DENND4AQ7Z401 1863 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 CYBBP04839 570 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 MAPKAPK2P49137 400 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 CDH4P55283 916 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 LLGL1Q15334 1064 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 NCBP2-AS2Q69YL0 99 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 CHST9Q7L1S5 443 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 C14orf80Q86SX3 495 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 PLD5Q8N7P1 536 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 BPIFB1Q8TDL5 484 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 WBP2Q969T9 261 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 CARD6Q9BX69 1037 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 ZFP14Q9HCL3 533 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 TMEM248Q9NWD8 314 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 THG1LQ9NWX6 298 aaKnown RBP24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 SMARCAL1Q9NZC9 954 aa24.27■■□□□ 1.48
TSPAN4-202ENST00000397396 GOLGA6L7A0A1B0GV03 622 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 A0A1B0GVM2 712 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 TCAF2A6NFQ2 919 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 MCF2LO15068 1137 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 NCAM2O15394 837 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 CLDN11O75508 207 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 SLU7O95391 586 aaKnown RBP24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 KCNA5P22460 613 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 SLC6A4P31645 630 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 CHRNA3P32297 505 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 CCNG2Q16589 344 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 CYP1B1Q16678 543 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 MPPE1Q53F39 396 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 MPP7Q5T2T1 576 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 MTSS1LQ765P7 747 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 ADAT2Q7Z6V5 191 aaKnown RBP24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 BBS7Q8IWZ6 715 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 ZNF557Q8N988 423 aaPredicted RBP24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 C12orf50Q8NA57 414 aaPredicted RBP24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 TDRD5Q8NAT2 981 aaKnown RBP24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 HLA-CQ95604 372 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 HERPUD2Q9BSE4 406 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 AP1M1Q9BXS5 423 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 CDH22Q9UJ99 828 aa24.26■■□□□ 1.47
TSPAN4-202ENST00000397396 H3BQ06 376 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 PHF2O75151 1096 aa24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 MX2P20592 715 aa24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 FNTAP49354 379 aa24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 ADCY2Q08462 1091 aa24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 SIX1Q15475 284 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 CCDC85BQ15834 202 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 RFWD3Q6PCD5 774 aa24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 DRICH1Q6PGQ1 229 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 CCDC117Q8IWD4 279 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 HAUS1Q96CS2 278 aa24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 TMA16Q96EY4 203 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 LRRC19Q9H756 370 aa24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 FEZ2Q9UHY8 353 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-202ENST00000397396 TCRBV7S2A1N4TA0A589 114 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 GFRA2O00451 464 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 LAMP2P13473 410 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 IFNAR2P48551 515 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 OTUD4Q01804 1114 aaKnown RBP24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 LMNB2Q03252 620 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 NOMO1Q15155 1222 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 NLRP14Q86W24 1093 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 PRELID2Q8N945 189 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 IGSF8Q969P0 613 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 PRICKLE1Q96MT3 831 aaPredicted RBP24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 MYADMQ96S97 322 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 BRD8Q9H0E9 1235 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 EPS15L1Q9UBC2 864 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 FAM50BQ9Y247 325 aa24.24■■□□□ 1.47
TSPAN4-202ENST00000397396 PPP1R12AO14974 1030 aaPredicted RBP24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 XRCC4Q13426 336 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 C6orf118Q5T5N4 469 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 CCDC70Q6NSX1 233 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 C1orf228Q6PIY5 440 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 LRRC49Q8IUZ0 686 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 ACTL9Q8TC94 416 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 GRK7Q8WTQ7 553 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 DEPDC1BQ8WUY9 529 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 OSCP1Q8WVF1 389 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 MAGOHBQ96A72 148 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 ELSPBP1Q96BH3 223 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 FERMT1Q9BQL6 677 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 RBM12Q9NTZ6 932 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 ETNK2Q9NVF9 386 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 MPP6Q9NZW5 540 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 HEY1Q9Y5J3 304 aa24.23■■□□□ 1.47
TSPAN4-202ENST00000397396 HEPACAM2A8MVW5 462 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 HACD1B0YJ81 288 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 MBTPS2O43462 519 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms