RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SORCS3Q9UPU3 1222 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 SSC5DA1L4H1 1573 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 DNAJA2O60884 412 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 CHRNGP07510 517 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 ABCE1P61221 599 aaKnown RBP14.3□□□□□ -0.12
NUP98-204ENST00000397004 MXD4Q14582 209 aaPredicted RBP14.3□□□□□ -0.12
NUP98-204ENST00000397004 OGFRL1Q5TC84 451 aaPredicted RBP14.3□□□□□ -0.12
NUP98-204ENST00000397004 EPGNQ6UW88 154 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 CYS1Q717R9 158 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 TMEM110Q86TL2 294 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 SESTD1Q86VW0 696 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 TMEM151AQ8N4L1 468 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 PDZD7Q9H5P4 517 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 SBK3P0C264 359 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 COX4I1P13073 169 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 SLC6A3Q01959 620 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 CUL3Q13618 768 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 BSPRYQ5W0U4 402 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 METTL7BQ6UX53 244 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 PPP1R14CQ8TAE6 165 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 NMD3Q96D46 503 aaKnown RBP14.3□□□□□ -0.12
NUP98-204ENST00000397004 DICER1Q9UPY3 1922 aaKnown RBP14.3□□□□□ -0.12
NUP98-204ENST00000397004 PGK2P07205 417 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 ARSAP15289 507 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 MED21Q13503 144 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 WDR78Q5VTH9 848 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 EFCAB12Q6NXP0 572 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 CASC4Q6P4E1 433 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 ZBTB8OSQ8IWT0 167 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 GTF2IRD1Q9UHL9 959 aa14.3□□□□□ -0.12
NUP98-204ENST00000397004 C15orf38-AP3S2A0A0A6YYH1 394 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 GOLGA8QA0A0J9YX86 632 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 GOLGA8OA6NCC3 632 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 GOLGA8NF8WBI6 632 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 STX16-NPEPL1H3BU86 382 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 MFSD11O43934 449 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 USP12O75317 370 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 NUMBP49757 651 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 KLF10Q13118 480 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 DALRD3Q5D0E6 543 aaKnown RBP14.29□□□□□ -0.12
NUP98-204ENST00000397004 ARPINQ7Z6K5 226 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 CENPIQ92674 756 aaPredicted RBP14.29□□□□□ -0.12
NUP98-204ENST00000397004 APBB2Q92870 758 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 PRICKLE1Q96MT3 831 aaPredicted RBP14.29□□□□□ -0.12
NUP98-204ENST00000397004 WDR90Q96KV7 1748 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 OPHN1O60890 802 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 KLHL2O95198 593 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 RALBP11234 206 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 GLDCP23378 1020 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 SERPINB9P50453 376 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 CDKL1Q00532 357 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 ZRSR2Q15696 482 aaKnown RBP14.29□□□□□ -0.12
NUP98-204ENST00000397004 Q3C1V9 767 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 MMEL1Q495T6 779 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 C6orf163Q5TEZ5 329 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 OTUD1Q5VV17 481 aaPredicted RBP14.29□□□□□ -0.12
NUP98-204ENST00000397004 MAP7D3Q8IWC1 876 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 ANKRD20A4Q4UJ75 823 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 MICALL2Q8IY33 904 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 RNF148Q8N7C7 305 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 COLGALT1Q8NBJ5 622 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 ZMAT2Q96NC0 199 aaKnown RBP14.29□□□□□ -0.12
NUP98-204ENST00000397004 RBM38Q9H0Z9 239 aaKnown RBP14.29□□□□□ -0.12
NUP98-204ENST00000397004 SNX15Q9NRS6 342 aa14.29□□□□□ -0.12
NUP98-204ENST00000397004 GLRA3O75311 464 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 ARF4P18085 180 aaPredicted RBP14.28□□□□□ -0.12
NUP98-204ENST00000397004 PSMB4P28070 264 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 SDC4P31431 198 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 SERPINB6P35237 376 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 MAGEA12P43365 314 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 THOP1P52888 689 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 ATXN3P54252 364 aaPredicted RBP14.28□□□□□ -0.12
NUP98-204ENST00000397004 MYBPC1Q00872 1141 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 TMEM198Q66K66 360 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 TICAM1Q8IUC6 712 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 DCLK2Q8N568 766 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 B4GALNT2Q8NHY0 566 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 HTR3CQ8WXA8 447 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 LTBP3Q9NS15 1303 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 A0A087WZ62 844 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 I6L893 689 aaPredicted RBP14.28□□□□□ -0.12
NUP98-204ENST00000397004 AP1G1O43747 822 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 XRCC1P18887 633 aaPredicted RBP14.28□□□□□ -0.12
NUP98-204ENST00000397004 PCSK6P29122 969 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 SERPINB5P36952 375 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 GJC2Q5T442 439 aaPredicted RBP14.28□□□□□ -0.12
NUP98-204ENST00000397004 DRAXINQ8NBI3 349 aaPredicted RBP14.28□□□□□ -0.12
NUP98-204ENST00000397004 FDXACB1Q9BRP7 624 aaPredicted RBP14.28□□□□□ -0.12
NUP98-204ENST00000397004 AP4E1Q9UPM8 1137 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 FDFT1P37268 417 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 ALDH1A3P47895 512 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 LRRC8BQ6P9F7 803 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 SPATA24Q86W54 205 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 P2RY11Q96G91 374 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 DCUN1D1Q96GG9 259 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 ANLNQ9NQW6 1124 aa14.28□□□□□ -0.12
NUP98-204ENST00000397004 ATP5BP06576 529 aaKnown RBP14.27□□□□□ -0.12
NUP98-204ENST00000397004 CHN2P52757 468 aa14.27□□□□□ -0.12
NUP98-204ENST00000397004 ARHGAP22Q7Z5H3 698 aa14.27□□□□□ -0.12
NUP98-204ENST00000397004 ACMSDQ8TDX5 336 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms