RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 EPB41L4BQ9H329 900 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 NDFIP2Q9NV92 336 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 C5orf60A6NFR6 353 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 CCDC85CA6NKD9 419 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 H7C0C1 242 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 KLKB1P03952 638 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 ATP5OP48047 213 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 CAV1Q03135 178 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 MTA1Q13330 715 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 FAM133BQ5BKY9 247 aaKnown RBP13.1□□□□□ -0.31
TRIM39-204ENST00000396548 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 RSAD2Q8WXG1 361 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 PLD4Q96BZ4 506 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 SLC22A12Q96S37 553 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 LGMNQ99538 433 aa13.1□□□□□ -0.31
TRIM39-204ENST00000396548 STC2O76061 302 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 MOCS2O96007 188 aaPredicted RBP13.09□□□□□ -0.31
TRIM39-204ENST00000396548 APOEP02649 317 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 SRGAP2BP0DMP2 458 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 MAGEA6P43360 314 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 PPIDQ08752 370 aaKnown RBP13.09□□□□□ -0.31
TRIM39-204ENST00000396548 GPS1Q13098 491 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 HLTFQ14527 1009 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRIM39-204ENST00000396548 IZUMO3Q5VZ72 239 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 NUGGCQ68CJ6 796 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 NAT8LQ8N9F0 302 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 TFB1MQ8WVM0 346 aaKnown RBP13.09□□□□□ -0.31
TRIM39-204ENST00000396548 CPT1BQ92523 772 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 IGSF8Q969P0 613 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 NOL6Q9H6R4 1146 aaKnown RBP13.09□□□□□ -0.31
TRIM39-204ENST00000396548 TPX2Q9ULW0 747 aaKnown RBP13.09□□□□□ -0.31
TRIM39-204ENST00000396548 GFRA2O00451 464 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 KCNN4O15554 427 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 HOXA9P31269 272 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 SLC6A4P31645 630 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 CHKAP35790 457 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 FBXL22Q6P050 247 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 RTL3Q8N8U3 475 aaKnown RBP13.09□□□□□ -0.31
TRIM39-204ENST00000396548 BBOF1Q8ND07 529 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 HDAC11Q96DB2 347 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 PRDM12Q9H4Q4 367 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 TMEM248Q9NWD8 314 aa13.09□□□□□ -0.31
TRIM39-204ENST00000396548 GOLGA6L7A0A1B0GV03 622 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 POU2F2P09086 479 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 CA8P35219 290 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 VPS41P49754 854 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 WASHC5Q12768 1159 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 GPM6BQ13491 265 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 PDK1Q15118 436 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 PABPC1LQ4VXU2 614 aaKnown RBP13.08□□□□□ -0.32
TRIM39-204ENST00000396548 SPDYCQ5MJ68 293 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 FAM182AQ5T1J6 154 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 RELL1Q8IUW5 271 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 IQCKQ8N0W5 287 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 HTR3CQ8WXA8 447 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 PRCCQ92733 491 aaPredicted RBP13.08□□□□□ -0.32
TRIM39-204ENST00000396548 ANAPC5Q9UJX4 755 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 NCAM2O15394 837 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 MOSPD3O75425 235 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 LRG1P02750 347 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 HMBSP08397 361 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 GARSP41250 739 aaKnown RBP13.08□□□□□ -0.32
TRIM39-204ENST00000396548 CCR2P41597 374 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 ZNF33AQ06730 810 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 KCNC3Q14003 757 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 KCNJ11Q14654 390 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 MORF4L2Q15014 288 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 BRD8Q9H0E9 1235 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 CATSPERBQ9H7T0 1116 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 GKN1Q9NS71 199 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 CLUHO75153 1309 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 EPOPA6NHQ4 379 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 AGPSO00116 658 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 EPCAMP16422 314 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 RHOQP17081 205 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 ALFQ53S48 1182 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 Q6ZNB5 142 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 ADGRD2Q7Z7M1 963 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 HOOK3Q86VS8 718 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 UMODL1-AS1Q8N2C9 162 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 ZCCHC9Q8N567 271 aaKnown RBP13.08□□□□□ -0.32
TRIM39-204ENST00000396548 P2RY11Q96G91 374 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 TSGA13Q96PP4 275 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 CYP2S1Q96SQ9 504 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 MAN1C1Q9NR34 630 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 MPP6Q9NZW5 540 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 SLC12A6Q9UHW9 1150 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 VANGL2Q9ULK5 521 aa13.08□□□□□ -0.32
TRIM39-204ENST00000396548 NUP205Q92621 2012 aa13.07□□□□□ -0.32
TRIM39-204ENST00000396548 TCRBV7S3A2A0A539 114 aa13.07□□□□□ -0.32
TRIM39-204ENST00000396548 H0YGN5 161 aa13.07□□□□□ -0.32
TRIM39-204ENST00000396548 ACSL4O60488 711 aa13.07□□□□□ -0.32
TRIM39-204ENST00000396548 CNTN5O94779 1100 aa13.07□□□□□ -0.32
TRIM39-204ENST00000396548 IFNB1P01574 187 aa13.07□□□□□ -0.32
TRIM39-204ENST00000396548 COG7P83436 770 aa13.07□□□□□ -0.32
TRIM39-204ENST00000396548 CALCOCO2Q13137 446 aa13.07□□□□□ -0.32
TRIM39-204ENST00000396548 UBAP2Q5T6F2 1119 aaKnown RBP13.07□□□□□ -0.32
TRIM39-204ENST00000396548 ANKRD22Q5VYY1 191 aa13.07□□□□□ -0.32
TRIM39-204ENST00000396548 RAP1GAP2Q684P5 730 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms