RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 TMPRSS4Q9NRS4 437 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 SF3B1O75533 1304 aaKnown RBP eCLIP16.12■□□□□ 0.17
HOXA3-202ENST00000396352 CLGNO14967 610 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 ARL4AP40617 200 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 MLH1P40692 756 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 GLUD2P49448 558 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 BCAT1P54687 386 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 EPHB1P54762 984 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 DEUP1Q05D60 604 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 PEX6Q13608 980 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 ZBTB6Q15916 424 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 OTUD1Q5VV17 481 aaPredicted RBP16.11■□□□□ 0.17
HOXA3-202ENST00000396352 MTHFD1LQ6UB35 978 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 CMC1Q7Z7K0 106 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 ISL2Q96A47 359 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 NAT9Q9BTE0 207 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 SNX15Q9NRS6 342 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.11■□□□□ 0.177e-7■■□□□ 12.1
HOXA3-202ENST00000396352 RCOR3Q9P2K3 495 aaPredicted RBP16.11■□□□□ 0.17
HOXA3-202ENST00000396352 E2F8A0AVK6 867 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 ZNF286BP0CG31 522 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 TYK2P29597 1187 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 ITGA9Q13797 1035 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 SFT2D3Q587I9 215 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 FRMD7Q6ZUT3 714 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 KBTBD7Q8WVZ9 684 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 CERS2Q96G23 380 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 SNX27Q96L92 541 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 FCRL3Q96P31 734 aaPredicted RBP16.11■□□□□ 0.17
HOXA3-202ENST00000396352 DERAQ9Y315 318 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 TSC2P49815 1807 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 CYP2C8P10632 490 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 CALRP27797 417 aaKnown RBP16.11■□□□□ 0.17
HOXA3-202ENST00000396352 GP5P40197 560 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 MSLNQ13421 630 aaPredicted RBP16.11■□□□□ 0.17
HOXA3-202ENST00000396352 OLIG2Q13516 323 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 ZNF567Q8N184 647 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 CMTM5Q96DZ9 223 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 GORASP1Q9BQQ3 440 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 SNTG2Q9NY99 539 aa16.11■□□□□ 0.17
HOXA3-202ENST00000396352 PCNTO95613 3336 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 ASPHQ12797 758 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 LPCAT4Q643R3 524 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 ACAD11Q709F0 780 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 PLD6Q8N2A8 252 aaKnown RBP16.1■□□□□ 0.17
HOXA3-202ENST00000396352 LRRC52Q8N7C0 313 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 SLC26A7Q8TE54 656 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 AZIN2Q96A70 460 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 PGBD4Q96DM1 585 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 CYP4F11Q9HBI6 524 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 POMPQ9Y244 141 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 PCDHB12Q9Y5F1 795 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 CSADQ9Y600 493 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 SBF1O95248 1867 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 SCN4AP35499 1836 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 ZBTB14O43829 449 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 POLBP06746 335 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 CPA3P15088 417 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 LMO2P25791 158 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 MATKP42679 507 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 INHBEP58166 350 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 MAMDC4Q6UXC1 1216 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 NAPRTQ6XQN6 538 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 DEFB107AQ8IZN7 70 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 TNS4Q8IZW8 715 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 DCLK2Q8N568 766 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 JADE3Q92613 823 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 CCDC124Q96CT7 223 aaKnown RBP16.1■□□□□ 0.17
HOXA3-202ENST00000396352 OTUD5Q96G74 571 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 CPNE1Q99829 537 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 PLEKHA5Q9HAU0 1116 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 TBC1D30Q9Y2I9 924 aa16.1■□□□□ 0.17
HOXA3-202ENST00000396352 STK10O94804 968 aaKnown RBP16.09■□□□□ 0.17
HOXA3-202ENST00000396352 PDGFRBP09619 1106 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 MX2P20592 715 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 PITX1P78337 314 aaPredicted RBP16.09■□□□□ 0.17
HOXA3-202ENST00000396352 LRRC36Q1X8D7 754 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 CCDC153Q494R4 210 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 HPS6Q86YV9 775 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 TP53INP2Q8IXH6 220 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 RNF139Q8WU17 664 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 NDRG1Q92597 394 aaKnown RBP16.09■□□□□ 0.17
HOXA3-202ENST00000396352 GBP5Q96PP8 586 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 RBBP8Q99708 897 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 COG4Q9H9E3 785 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 SEPT10Q9P0V9 454 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 RPS6KL1Q9Y6S9 549 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 COL1A2P08123 1366 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 F7P08709 466 aaPredicted RBP16.09■□□□□ 0.17
HOXA3-202ENST00000396352 NCF2P19878 526 aaPredicted RBP16.09■□□□□ 0.17
HOXA3-202ENST00000396352 PEX2P28328 305 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 HOXA11P31270 313 aaPredicted RBP16.09■□□□□ 0.17
HOXA3-202ENST00000396352 USP4Q13107 963 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 DCAF4L1Q3SXM0 396 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 SLC25A52Q3SY17 297 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 GLRA4Q5JXX5 417 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 SPANXN3Q5MJ09 141 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 MARCH8Q5T0T0 291 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 GRTP1Q5TC63 336 aa16.09■□□□□ 0.17
HOXA3-202ENST00000396352 EPGNQ6UW88 154 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms