RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 FBXO43Q4G163 708 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 DAB2IPQ5VWQ8 1189 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 CIR1Q86X95 450 aaPredicted RBP19.81■□□□□ 0.76
HOXA9-202ENST00000396345 SFTPA1Q8IWL2 248 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 LRRC8AQ8IWT6 810 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 ZNF683Q8IZ20 524 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 SYNPOQ8N3V7 929 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 ZNF557Q8N988 423 aaPredicted RBP19.81■□□□□ 0.76
HOXA9-202ENST00000396345 FIBINQ8TAL6 211 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 EZH1Q92800 747 aaPredicted RBP19.81■□□□□ 0.76
HOXA9-202ENST00000396345 PEBP4Q96S96 227 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 MAGEB5Q9BZ81 275 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 USP18Q9UMW8 372 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 TFR2Q9UP52 801 aa19.81■□□□□ 0.76
HOXA9-202ENST00000396345 IGLV3-10A0A075B6K4 115 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 A0A1B0GVM2 712 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 TCAF2A6NFQ2 919 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 DRGXA6NNA5 263 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 H0Y626 953 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 K7EQS6 105 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 PROSCO94903 275 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 AVPR2P30518 371 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 ARHGAP25P42331 645 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 MAGEA9P43362 315 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 NOP2P46087 812 aaKnown RBP19.8■□□□□ 0.76
HOXA9-202ENST00000396345 IRAK1P51617 712 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 CDH18Q13634 790 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 ERMARDQ5T6L9 678 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 CHST9Q7L1S5 443 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 ANKS1BQ7Z6G8 1248 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 KIAA1328Q86T90 577 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 CCAR2Q8N163 923 aaKnown RBP19.8■□□□□ 0.76
HOXA9-202ENST00000396345 PYROXD2Q8N2H3 581 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 TMEM105Q8N8V8 129 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 CCDC26Q8TAB7 109 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 WFDC5Q8TCV5 224 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 DLGAP2Q9P1A6 1054 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 AP4E1Q9UPM8 1137 aa19.8■□□□□ 0.76
HOXA9-202ENST00000396345 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.79■□□□□ 0.76
HOXA9-202ENST00000396345 TMEM110-MUSTN1A8MSY1 372 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 FAM72CH0Y354 149 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 ARHGAP6O43182 974 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 CLDN11O75508 207 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 HLA-FP30511 346 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 SSR1P43307 286 aaKnown RBP19.79■□□□□ 0.76
HOXA9-202ENST00000396345 VAV2P52735 878 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 CDH4P55283 916 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 SEC13P55735 322 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 ZNF177Q13360 481 aaPredicted RBP19.79■□□□□ 0.76
HOXA9-202ENST00000396345 MESDQ14696 234 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 FAM72AQ5TYM5 149 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 FAM72DQ6L9T8 149 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 FAM72BQ86X60 149 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 DESI2Q9BSY9 194 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 SNRNP25Q9BV90 132 aaKnown RBP19.79■□□□□ 0.76
HOXA9-202ENST00000396345 ABCB8Q9NUT2 735 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 GPATCH2LQ9NWQ4 482 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 MPP6Q9NZW5 540 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 PPARGC1AQ9UBK2 798 aaKnown RBP19.79■□□□□ 0.76
HOXA9-202ENST00000396345 GGA2Q9UJY4 613 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 HCN4Q9Y3Q4 1203 aa19.79■□□□□ 0.76
HOXA9-202ENST00000396345 A0A0A6YYK5 440 aaPredicted RBP19.78■□□□□ 0.76
HOXA9-202ENST00000396345 RCCD1A6NED2 376 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 PRRT4C9JH25 899 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 NRDCO43847 1150 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 RNF40O75150 1001 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 CNTN5O94779 1100 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 TCF4P15884 667 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 L1CAMP32004 1257 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 CD70P32970 193 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 MAN1A1P33908 653 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 GEN1Q17RS7 908 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 BOLA3Q53S33 107 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 ALFQ53S48 1182 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 ARTNQ5T4W7 220 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 MANEALQ5VSG8 457 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 RWDD4Q6NW29 188 aaKnown RBP19.78■□□□□ 0.76
HOXA9-202ENST00000396345 CYP4V2Q6ZWL3 525 aaPredicted RBP19.78■□□□□ 0.76
HOXA9-202ENST00000396345 PSTKQ8IV42 348 aaKnown RBP19.78■□□□□ 0.76
HOXA9-202ENST00000396345 TXLNBQ8N3L3 684 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.78■□□□□ 0.76
HOXA9-202ENST00000396345 WFIKKN2Q8TEU8 576 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 TBC1D31Q96DN5 1066 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 EPAS1Q99814 870 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 ZYG11BQ9C0D3 744 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 CHRDQ9H2X0 955 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 DHX35Q9H5Z1 703 aaKnown RBP19.78■□□□□ 0.76
HOXA9-202ENST00000396345 ZWILCHQ9H900 591 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 KIAA1522Q9P206 1035 aaPredicted RBP19.78■□□□□ 0.76
HOXA9-202ENST00000396345 ATG2BQ96BY7 2078 aa19.78■□□□□ 0.76
HOXA9-202ENST00000396345 DOCK4Q8N1I0 1966 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 CREB3O43889 395 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 LRIG2O94898 1065 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 PABPC1P11940 636 aaKnown RBP19.77■□□□□ 0.76
HOXA9-202ENST00000396345 IL1R2P27930 398 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 HADHBP55084 474 aaKnown RBP19.77■□□□□ 0.76
HOXA9-202ENST00000396345 SLC25A11Q02978 314 aaKnown RBP19.77■□□□□ 0.76
HOXA9-202ENST00000396345 LMAN2Q12907 356 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 CA9Q16790 459 aa19.77■□□□□ 0.76
HOXA9-202ENST00000396345 HADHQ16836 314 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms