RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 P2RY11Q96G91 374 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 SNX25Q9H3E2 840 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 XPNPEP3Q9NQH7 507 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 SETD4Q9NVD3 440 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 GINS2Q9Y248 185 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 ZNF236Q9UL36 1845 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 SPECC1L-ADORA2AF8WAN1 911 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 RNF103O00237 685 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 TPP1O14773 563 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 SPTLC1O15269 473 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 TBX10O75333 385 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 DAB1O75553 588 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 PNPLA4P41247 253 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 CRADDP78560 199 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 KLC1Q07866 573 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 TMEM62Q0P6H9 643 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 PDE1CQ14123 709 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 DGKDQ16760 1214 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 DUSP28Q4G0W2 176 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 DNAL1Q4LDG9 190 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 ATP2A3Q93084 1043 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 FERMT1Q9BQL6 677 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 C1orf21Q9H246 121 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 DCDC2Q9UHG0 476 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 PLIN3O60664 434 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 TM7SF2O76062 418 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 FGF3P11487 239 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 SMPD1P17405 629 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 MGAT1P26572 445 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 RANBP1P43487 201 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 SESN3P58005 492 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 TAF1CQ15572 869 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 TEDDM1Q5T9Z0 273 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 N4BP2L1Q5TBK1 243 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 OTUD1Q5VV17 481 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 LRRC74BQ6ZQY2 392 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 ARHGAP22Q7Z5H3 698 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 NET1Q7Z628 596 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 PLEKHH3Q7Z736 793 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 WDR75Q8IWA0 830 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 FBXO27Q8NI29 283 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 PPP1R14CQ8TAE6 165 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 PIWIL2Q8TC59 973 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 RNF139Q8WU17 664 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 NRG4Q8WWG1 115 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 NT5C3BQ969T7 300 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 TRIM4Q9C037 500 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 CDHR5Q9HBB8 845 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 SLC17A6Q9P2U8 582 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 ZNF212Q9UDV6 495 aa16.41■□□□□ 0.22
CCHCR1-202ENST00000396263 FAM155AB1AL88 458 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 AOC1P19801 751 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 POLE2P56282 527 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 SESN2P58004 480 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 AP1B1Q10567 949 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 PDK1Q15118 436 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 INSCQ1MX18 579 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 ZNF618Q5T7W0 954 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 OR52E8Q6IFG1 317 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 PIGZQ86VD9 579 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 APPL2Q8NEU8 664 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 IFT43Q96FT9 208 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 TNIP3Q96KP6 325 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 ZNF778Q96MU6 729 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 FAM161BQ96MY7 647 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 RILPQ96NA2 401 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 EBF4Q9BQW3 602 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 FAM49AQ9H0Q0 323 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 IGSF9Q9P2J2 1179 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 RPS6KL1Q9Y6S9 549 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 SMIM28A0A1B0GU29 152 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 F5H423 210 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 ITGA2BP08514 1039 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 DARSP14868 501 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 TKTP29401 623 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 TAF6P49848 677 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 ALDH18A1P54886 795 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 IRX4P78413 519 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 TUBB3Q13509 450 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 THOC5Q13769 683 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 RCN2Q14257 317 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 PAFAH1B3Q15102 231 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 XKR4Q5GH76 650 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 C16orf46Q6P387 395 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 DPP9Q86TI2 863 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 SCUBE1Q8IWY4 988 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 OR6J1Q8NGC5 347 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 NPLOC4Q8TAT6 608 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 MAML3Q96JK9 1138 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 TSPAN18Q96SJ8 248 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 OSMRQ99650 979 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 RNF19AQ9NV58 838 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 G3BP2Q9UN86 482 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 TLL2Q9Y6L7 1015 aa16.4■□□□□ 0.22
CCHCR1-202ENST00000396263 TSC2P49815 1807 aa16.39■□□□□ 0.21
CCHCR1-202ENST00000396263 PRR5-ARHGAP8B1AHC4 643 aa16.39■□□□□ 0.21
CCHCR1-202ENST00000396263 XPOTO43592 962 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-202ENST00000396263 KCNE1P15382 129 aa16.39■□□□□ 0.21
CCHCR1-202ENST00000396263 AKAP5P24588 427 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms