RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 RPRD1AQ96P16 312 aaPredicted RBP10.19□□□□□ -0.78
DDX39B-202ENST00000396172 CSPG4P5Q96PW8 444 aa10.19□□□□□ -0.78
DDX39B-202ENST00000396172 PSMB7Q99436 277 aa10.19□□□□□ -0.78
DDX39B-202ENST00000396172 PRMT1Q99873 361 aaKnown RBP10.19□□□□□ -0.78
DDX39B-202ENST00000396172 PHF7Q9BWX1 381 aaPredicted RBP10.19□□□□□ -0.78
DDX39B-202ENST00000396172 ZYG11BQ9C0D3 744 aa10.19□□□□□ -0.78
DDX39B-202ENST00000396172 SMG9Q9H0W8 520 aaKnown RBP10.19□□□□□ -0.78
DDX39B-202ENST00000396172 CDH22Q9UJ99 828 aa10.19□□□□□ -0.78
DDX39B-202ENST00000396172 COL4A2P08572 1712 aa10.19□□□□□ -0.78
DDX39B-202ENST00000396172 A0A1B0GVM2 712 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 TCAF2A6NFQ2 919 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 C3orf70A6NLC5 250 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 HEPACAM2A8MVW5 462 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 EFCAB8A8MWE9 144 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 APOL1O14791 398 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 GREM1O60565 184 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 SASH3O75995 380 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 URI1O94763 535 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 SEC31AO94979 1220 aaKnown RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 NFATC1O95644 943 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 KLKB1P03952 638 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 RHOQP17081 205 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 GOT1P17174 413 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 TGM2P21980 687 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 EPHB2P29323 1055 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 CXCR5P32302 372 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 PDGFRLQ15198 375 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 WHAMMP3Q1A5X7 153 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 C5orf22Q49AR2 442 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 MPPE1Q53F39 396 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 MPP7Q5T2T1 576 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 NADSYN1Q6IA69 706 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 RWDD4Q6NW29 188 aaKnown RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 BZW1Q7L1Q6 419 aaKnown RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 CHST9Q7L1S5 443 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 LGI2Q8N0V4 545 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 PYROXD2Q8N2H3 581 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 RASGEF1CQ8N431 466 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 LZTR1Q8N653 840 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 OSCP1Q8WVF1 389 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 ATP2A3Q93084 1043 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 RNF157Q96PX1 679 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 FRMD8P1Q9BZ68 369 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 EPC1Q9H2F5 836 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 ANLNQ9NQW6 1124 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 CWC15Q9P013 229 aaKnown RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 CDC23Q9UJX2 597 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 VANGL2Q9ULK5 521 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 RAD54BQ9Y620 910 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 WASH4PA8MWX3 477 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 I6L893 689 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 SRGAP2O75044 1071 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 CLDN11O75508 207 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 ADH1CP00326 375 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 PSMC3P17980 439 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 FCARP24071 287 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 MAPKAPK2P49137 400 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 OXCT1P55809 520 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 ZXDBP98169 803 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 ZNF211Q13398 564 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 DPYSQ14117 519 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 PTCRAQ6ISU1 281 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 FBXL22Q6P050 247 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 TMCO3Q6UWJ1 677 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 BBS12Q6ZW61 710 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 MFSD6LQ8IWD5 586 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 BBS7Q8IWZ6 715 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 MNS1Q8NEH6 495 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 ARHGEF4Q9NR80 690 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 TMPRSS4Q9NRS4 437 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 HOMER3Q9NSC5 361 aa10.18□□□□□ -0.78
DDX39B-202ENST00000396172 DUS2Q9NX74 493 aaKnown RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 XPO7Q9UIA9 1087 aaKnown RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 MYO18AQ92614 2054 aaKnown RBP10.18□□□□□ -0.78
DDX39B-202ENST00000396172 DRGXA6NNA5 263 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 APOC4-APOC2K7ER74 178 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 APOC2P02655 101 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 FGGP02679 453 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 CD48P09326 243 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 NR2C2P49116 596 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 CDH4P55283 916 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 FCHO2Q0JRZ9 810 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 LONRF2Q1L5Z9 754 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 SLC9A4Q6AI14 798 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 SLC13A5Q86YT5 568 aaPredicted RBP10.17□□□□□ -0.78
DDX39B-202ENST00000396172 ZDHHC14Q8IZN3 488 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 RPGRIP1Q96KN7 1286 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 TMEM248Q9NWD8 314 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.17□□□□□ -0.78
DDX39B-202ENST00000396172 MARK1Q9P0L2 795 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 THEGQ9P2T0 379 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 ANKRD36A6QL64 1941 aa10.17□□□□□ -0.78
DDX39B-202ENST00000396172 FAM72CH0Y354 149 aa10.16□□□□□ -0.78
DDX39B-202ENST00000396172 NCAM2O15394 837 aa10.16□□□□□ -0.78
DDX39B-202ENST00000396172 CST8O60676 142 aa10.16□□□□□ -0.78
DDX39B-202ENST00000396172 ERCC2P18074 760 aa10.16□□□□□ -0.78
DDX39B-202ENST00000396172 SLC6A4P31645 630 aa10.16□□□□□ -0.78
DDX39B-202ENST00000396172 ETFBP38117 255 aa10.16□□□□□ -0.78
DDX39B-202ENST00000396172 VIPR2P41587 438 aa10.16□□□□□ -0.78
DDX39B-202ENST00000396172 TUBB4BP68371 445 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms