RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 SIK2Q9H0K1 926 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 SPDYE4A6NLX3 237 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 PRRG1O14668 218 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 GLUD1P00367 558 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 VEPH1Q14D04 833 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 TADA2BQ86TJ2 420 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 TFB1MQ8WVM0 346 aaKnown RBP25.28■■□□□ 1.64
CTF1-202ENST00000395019 UBLCP1Q8WVY7 318 aaPredicted RBP25.28■■□□□ 1.64
CTF1-202ENST00000395019 MYLIPQ8WY64 445 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 GUCD1Q96NT3 240 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 ZIM3Q96PE6 472 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 IGFLR1Q9H665 355 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 PAK5Q9P286 719 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 SHOC2Q9UQ13 582 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 NEU3Q9UQ49 428 aa25.28■■□□□ 1.64
CTF1-202ENST00000395019 FARP1Q9Y4F1 1045 aaPredicted RBP25.28■■□□□ 1.64
CTF1-202ENST00000395019 LINC01565O15544 149 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 IGLV3-27P01718 113 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 APOEP02649 317 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 ACTN2P35609 894 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 CHKAP35790 457 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 GGCXP38435 758 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 KPNA1P52294 538 aaPredicted RBP25.27■■□□□ 1.64
CTF1-202ENST00000395019 MLLT6P55198 1093 aaPredicted RBP25.27■■□□□ 1.64
CTF1-202ENST00000395019 RING1Q06587 406 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 KCNC3Q14003 757 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 ZCCHC9Q8N567 271 aaKnown RBP25.27■■□□□ 1.64
CTF1-202ENST00000395019 ZNF512Q96ME7 567 aaPredicted RBP25.27■■□□□ 1.64
CTF1-202ENST00000395019 CCSER2Q9H7U1 834 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 INSL5Q9Y5Q6 135 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 HS3ST4Q9Y661 456 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 C2orf16Q68DN1 1984 aa25.27■■□□□ 1.64
CTF1-202ENST00000395019 ZNF840PA6NDX5 716 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 PPP1R12AO14974 1030 aaPredicted RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 NRLP54845 237 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 TWF1Q12792 350 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 PRKD1Q15139 912 aaPredicted RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 ARTNQ5T4W7 220 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 C4orf22Q6V702 233 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 CEP128Q6ZU80 1094 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 PPIL6Q8IXY8 311 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 ATP6V0D2Q8N8Y2 350 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 KREMEN2Q8NCW0 462 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 TBC1D31Q96DN5 1066 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 CDX2Q99626 313 aaPredicted RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 PABPC3Q9H361 631 aaKnown RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 MED4Q9NPJ6 270 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 MAN1C1Q9NR34 630 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 LMCD1Q9NZU5 365 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 SLC12A6Q9UHW9 1150 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 XPO7Q9UIA9 1087 aaKnown RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 SLC12A8A0AV02 714 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 SMAPO00193 183 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 NCAM2O15394 837 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 ZNF189O75820 626 aaPredicted RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 GLP2RO95838 553 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 MOCS2O96007 188 aaPredicted RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 POU3F3P20264 500 aaPredicted RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 SERPINB6P35237 376 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 TAF12Q16514 161 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 HEATR6Q6AI08 1181 aaKnown RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 GPR153Q6NV75 609 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 KLHDC10Q6PID8 442 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 LRIG3Q6UXM1 1119 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 HOOK3Q86VS8 718 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 MIB1Q86YT6 1006 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 MICALL1Q8N3F8 863 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 DEFB123Q8N688 67 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 CPT1BQ92523 772 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 TRPM5Q9NZQ8 1165 aa25.26■■□□□ 1.63
CTF1-202ENST00000395019 HBS1LQ9Y450 684 aaKnown RBP25.26■■□□□ 1.63
CTF1-202ENST00000395019 C5orf60A6NFR6 353 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 FGF10O15520 208 aaPredicted RBP25.25■■□□□ 1.63
CTF1-202ENST00000395019 GCATO75600 419 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 SRGAP2BP0DMP2 458 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 VAV1P15498 845 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 PPP3CCP48454 512 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 EPHB3P54753 998 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 MTA1Q13330 715 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 HECTD3Q5T447 861 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 CCDC25Q86WR0 208 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 CCDC33Q8N5R6 958 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 NAT8LQ8N9F0 302 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 LRRN4Q8WUT4 740 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 HTR3CQ8WXA8 447 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 PRCCQ92733 491 aaPredicted RBP25.25■■□□□ 1.63
CTF1-202ENST00000395019 BTN2A3PQ96KV6 586 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 RUFY1Q96T51 708 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 LGMNQ99538 433 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 BRD8Q9H0E9 1235 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 EPB41L4BQ9H329 900 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 CATSPERBQ9H7T0 1116 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 DNMT3LQ9UJW3 386 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 PLAAQ9Y263 795 aa25.25■■□□□ 1.63
CTF1-202ENST00000395019 ATP5C1P36542 298 aaKnown RBP25.24■■□□□ 1.63
CTF1-202ENST00000395019 FAM193AP78312 1265 aa25.24■■□□□ 1.63
CTF1-202ENST00000395019 PLD1Q13393 1074 aa25.24■■□□□ 1.63
CTF1-202ENST00000395019 HSP90B2PQ58FF3 399 aa25.24■■□□□ 1.63
CTF1-202ENST00000395019 ACBD5Q5T8D3 534 aaPredicted RBP25.24■■□□□ 1.63
CTF1-202ENST00000395019 PIK3R6Q5UE93 754 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms